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Pocket Recognition on a Protein Using Euclidean Voronoi Diagram of Atoms

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Book cover Computational Science and Its Applications – ICCSA 2005 (ICCSA 2005)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3480))

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Abstract

Proteins consist of atoms. Given a protein, the automatic recognition of depressed regions, called pockets, on the surface of the protein is important for protein-ligand docking and facilitates fast development of new drugs. Recently, computational approaches for the recognition of pockets have emerged. Presented in this paper is a geometric method for the pocket recognition based on Voronoi diagram for atoms in Euclidean distance metric.

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© 2005 Springer-Verlag Berlin Heidelberg

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Kim, DS., Cho, CH., Cho, Y., Won, C.I., Kim, D. (2005). Pocket Recognition on a Protein Using Euclidean Voronoi Diagram of Atoms. In: Gervasi, O., et al. Computational Science and Its Applications – ICCSA 2005. ICCSA 2005. Lecture Notes in Computer Science, vol 3480. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11424758_73

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  • DOI: https://doi.org/10.1007/11424758_73

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-25860-5

  • Online ISBN: 978-3-540-32043-2

  • eBook Packages: Computer ScienceComputer Science (R0)

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