Skip to main content

PDE-Based Three Dimensional Path Planning for Virtual Endoscopy

  • Conference paper
Information Processing in Medical Imaging (IPMI 2005)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 3565))

Abstract

Three dimensional medial paths or curve skeletons ( \(\mathcal{CS}\)) are an essential component of any virtual endoscopy (VE) system, because they serve as flight paths for a virtual camera to navigate the human organ and to examine its internal structures. In this paper, we propose a novel framework for computing flight paths of tubular structures for VE using partial differential equation (PDE). The method works in two passes. In the first pass, the overall topology of the organ is analyzed and its important topological nodes are identified, while in the second pass, the actual flight paths are computed by tracking them starting from each identified node. The proposed framework is robust, fully automatic, computationally efficient, and computes \(\mathcal{CS}\) that are centered, connected, thin, and less sensitive to boundary noise. We have extensively validated the robustness of the proposed method both quantitatively and qualitatively against several synthetic phantoms and clinical datasets.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Aylward, S.R., Bullitt, E.: Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction. IEEE Trans. Medical Imaging 21, 61–75 (2002)

    Article  Google Scholar 

  2. Deschamps, T., Cohen, L.D.: Fast extraction of minimal paths in 3d images and applications to virtual endoscopy. Medical Image Analysis 5 (2001)

    Google Scholar 

  3. Deschamps, T.: Curve and Shape Extraction with Minimal Path and Level-Sets techniques - Applications to 3D Medical Imaging. PhD thesis, Université Paris-IX Dauphine (2001)

    Google Scholar 

  4. Bitter, I., Kaufman, A.E., Sato, M.: Penalized-distance volumetric skeleton algorithm. IEEE Transactions on Visualization and Computer Graphics 7, 195–206 (2001)

    Article  Google Scholar 

  5. Dijkstra, E.W.: A note on two problems in connexion with graphs. Numerische Mathematik 1, 269–271 (1959)

    Article  MATH  MathSciNet  Google Scholar 

  6. Bouix, S., Siddiqi, K., Tannenbaum, A.: Flux driven fly throughs. In: Computer Vision and Pattern Recognition, pp. 449–454 (2003)

    Google Scholar 

  7. Zhou, Y., Toga, A.W.: Efficient skeletonization of volumetric objects. IEEE Transactions on Visualization and Computer Graphics 5, 196–209 (1999)

    Article  Google Scholar 

  8. Hassouna, M.S., Farag, A.A.: Robust centerline extraction framework using level sets. In: Proc. of IEEE Conference on Computer Vision and Pattern Recognition, San Diego, CA (2005)

    Google Scholar 

  9. Adalsteinsson, D., Sethian, J.: A fast level set method for propagating interfaces. Journal of Computational Physics 118, 269–277 (1995)

    Article  MATH  MathSciNet  Google Scholar 

  10. Sethian, J.: Level Sets Methods and Fast Marching Methods, 2nd edn. Cambridge University Press, Cambridge (1999)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2005 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Hassouna, M.S., Farag, A.A. (2005). PDE-Based Three Dimensional Path Planning for Virtual Endoscopy. In: Christensen, G.E., Sonka, M. (eds) Information Processing in Medical Imaging. IPMI 2005. Lecture Notes in Computer Science, vol 3565. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11505730_44

Download citation

  • DOI: https://doi.org/10.1007/11505730_44

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-26545-0

  • Online ISBN: 978-3-540-31676-3

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics