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Supervised Learning in the Gene Ontology Part I: A Rough Set Framework

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Book cover Transactions on Rough Sets IV

Part of the book series: Lecture Notes in Computer Science ((TRS,volume 3700))

Abstract

Prediction of gene function introduces a new learning problem where the decision classes associated with the objects (i.e., genes) are organized in a directed acyclic graph (DAG). Rough set theory, on the other hand, assumes that the classes are unrelated cannot handle this problem properly. To this end, we introduce a new rough set framework. The traditional decision system is extended into DAG decision system which can represent the DAG. From this system we develop several new operators, which can determine the known and the potential objects of a class and show how these sets can be combined with the usual rough set approximations. The properties of these operators are also investigated.

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Midelfart, H. (2005). Supervised Learning in the Gene Ontology Part I: A Rough Set Framework. In: Peters, J.F., Skowron, A. (eds) Transactions on Rough Sets IV. Lecture Notes in Computer Science, vol 3700. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11574798_5

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  • DOI: https://doi.org/10.1007/11574798_5

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-29830-4

  • Online ISBN: 978-3-540-32016-6

  • eBook Packages: Computer ScienceComputer Science (R0)

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