Abstract
Most HPC systems are clusters of shared memory nodes. Parallel programming must combine the distributed memory parallelization on the node inter-connect with the shared memory parallelization inside of each node. The hybrid MPI+OpenMP programming model is compared with pure MPI and compiler based parallelization. The paper focuses on bandwidth and latency aspects, but also whether programming paradigms can separate the optimization of communication and computation. Benchmark results are presented for hybrid and pure MPI communication.
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References
E. Ayguade, M. Gonzalez, J. Labarta, X. Martorell, N. Navarro, and J. Oliver, NanosCompiler: A Research Platform for OpenMP Extensions, in proceedings of the 1st European Workshop on OpenMP (EWOMP’99), Lund, Sweden, Sep. 1999.
Robert B. Ciotti, James R. Taft, and Jens Petersohn, Early Experiences with the 512 Processor Single System Image Origin2000, proceedings of the 42nd International Cray User Group Conference, SUMMIT 2000, Noordwijk, The Netherlands, May 22–26, 2000, http://www.cug.org.
Jonathan Harris, Extending OpenMP for NUMA Architectures, in proceedings of the Second European Workshop on OpenMP, EWOMP 2000.
D.S. Henty, Performance of hybrid message-passing and shared-memory parallelism for discrete element modeling, in Proc. Supercomputing’00, Dallas, TX, 2000. http://citeseer.nj.nec.com/henty00performance.html.
Alice E. Koniges, Rolf Rabenseifner, Karl Solchenbach, Benchmark Design for Characterization of Balanced High-Performance Architectures, in proceedings, 15th International Parallel and Distributed Processing Symposium (IPDPS’01), Workshop on Massively Parallel Processing, April 23–27, 2001, San Francisco, USA.
Richard D. Loft, Stephen J. Thomas, and John M. Dennis, Terascale spectral element dynamical core for atmospheric general circulation models, in proceedings, SC 2001, Nov. 2001, Denver, USA.
John Merlin, Distributed OpenMP: Extensions to OpenMP for SMP Clusters, in proceedings of the Second European Workshop on OpenMP, EWOMP 2000.
Message Passing Interface Forum. MPI-2: Extensions to the Message-Passing Interface, July 1997, http://www.mpi-forum.org.
Matthias M. Müller, Compiler-Generated Vector-based Prefetching on Architectures with Distributed Memory, in High Performance Computing in Science and Engineering’ 01, W. Jäger and E. Krause (eds), Springer, 2001.
The NANOS Project, Jesus Labarta, et al., http://research.ac.upc.es/hpc/nanos/.
OpenMP Group, http://www.openmp.org.
Rolf Rabenseifner and Alice E. Koniges, Effective Communication and File-I/O Bandwidth Benchmarks, in Recent Advances in Parallel Virtual Machine and Message Passing Interface, proceedings of the 8th European PVM/MPI Users’ Group Meeting, Santorini, Greece, LNCS 2131, Y. Cotronis, J. Dongarra (Eds.), Springer, 2001, pp 24–35, http://www.hlrs.de/mpi/beff/,http://www.hlrs.de/mpi/beffio/.
Mitsuhisa Sato, Shigehisa Satoh, Kazuhiro Kusano and Yoshio Tanaka, Design of OpenMP Compiler for an SMP Cluster, in proceedings of the 1st European Workshop on OpenMP (EWOMP’99), Lund, Sweden, Sep. 1999, pp 32–39. http://citeseer.nj.nec.com/sato99design.html.
G. Wellein, G. Hager, A. Basermann, and H. Fehske, Fast sparse matrix-vector multiplication for TeraFlop/s computers, in proceedings of Vector and Parallel Processing-VECPAR’2002, Porto, Portugal, June 26–28, 2002, Springer LNCS.
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Rabenseifner, R. (2002). Communication and Optimization Aspects on Hybrid Architectures. In: KranzlmĂĽller, D., Volkert, J., Kacsuk, P., Dongarra, J. (eds) Recent Advances in Parallel Virtual Machine and Message Passing Interface. EuroPVM/MPI 2002. Lecture Notes in Computer Science, vol 2474. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-45825-5_59
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DOI: https://doi.org/10.1007/3-540-45825-5_59
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