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Circular DNA and splicing systems

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Parallel Image Analysis (ICPIA 1992)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 654))

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Abstract

Circular strings representing DNA molecules and certain recombinant behaviour are formalized. Various actions of splicing schemes on linear and circular DNA molecules are examined. It is shown that there is a difference in the regularity result of Culik and Harju [1] between the linear and circular strings. A consequence of this result is that a conjecture of Head [4] that the circular string language of a splicing system under an action on circular strings is regular, when the set of initial circular strings is regular, is disproved.

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References

  1. K. Culik II and T. Harju (1991), The regularity of splicing systems and DNA, Discrete Applied Mathematics 31, 261–277.

    Google Scholar 

  2. R.W. Gatterdam (1989), Splicing systems and regularity, Int. J. Comp. Math., 31, 63–67.

    Google Scholar 

  3. T. Head (1987), Formal language theory and DNA: Analysis of the generative capacity of specific recombinant behaviours, Bull. Math. Bio., 49, 737–759.

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  4. T. Head (1991), Splicing schemes and DNA, manuscript.

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  5. B. Lewin (1990), Genes IV, New York, Oxford Univ. Press.

    Google Scholar 

  6. A. Rosenfeld (1975), A note on cycle grammars, Inform. Contr. 27, 374–377.

    Article  Google Scholar 

  7. G. Siromoney (1985), Studies on the traditional art of Kolam, Working paper, May 1985.

    Google Scholar 

  8. G. Siromoney and R. Siromoney, (1987), Rosenfeld's cycle grammars and Kolam in Graph-grammars and application to Computer Science, Lecture Notes in Computer Science, 291, Springer-Verlag.

    Google Scholar 

  9. G. Siromoney, R. Sirmoney and T. Robinson (1989), Kambi Kolam and Cycle grammars, In A Perspective in Theoretical Computer Science — Commemorative Volume for Gift Siromoney, Ed. R. Narasimhan, World Scientific, 267–300.

    Google Scholar 

  10. R. Siromoney (1969), On Equal Matrix Languages, Inform. Contr. 14, 135–151.

    Google Scholar 

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Akira Nakamura Maurice Nivat Ahmed Saoudi Patrick S. P. Wang Katsushi Inoue

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© 1992 Springer-Verlag Berlin Heidelberg

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Siromoney, R., Suhramanian, K.G., Dare, V.R. (1992). Circular DNA and splicing systems. In: Nakamura, A., Nivat, M., Saoudi, A., Wang, P.S.P., Inoue, K. (eds) Parallel Image Analysis. ICPIA 1992. Lecture Notes in Computer Science, vol 654. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-56346-6_44

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  • DOI: https://doi.org/10.1007/3-540-56346-6_44

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-56346-4

  • Online ISBN: 978-3-540-47538-5

  • eBook Packages: Springer Book Archive

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