Abstract
Neuroanatomical and neurofunctional studies are often referenced to a high resolution MR brain dataset. To allow intersubject comparisons of cortical structures, one needs to remove the outer hulls of the brain, align the dataset with a coordinate system and introduce a spatial normalization. We describe an image processing chain that combines all these steps in a single, interaction-free procedure.
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J. Talairach, M. David, P. Tournoux, H. Corredor, T. Ksasina: Atlas d'anatomie stereotactique des noyaux gris centraux. Masson Paris 1957.
J.C. Mazziotta, A.W. Toga, A. Evans, P. Fox, J. Lancaster: A probabilistic atlas of the human brain: theory and rationale for its development. Neuroimage 2, p. 89–101 (1995).
K. Friston: Statistical parametric mapping. in: Functional Neuroimaging: Technical Foundations, p. 79–91, Academic Press, Orlando 1995.
D.L. Collins, P. Neelin, T.M. Peters, A.C. Evans: Automatic 3D intersubject registration of MR volumetric data in standardized Talairach space. Journal of Computer Assisted Tomography 18 (2), p. 192–205 (1994).
P. Thompson, A.W. Toga: A surface-based technique for warping three-dimensional images of the brain. IEEE Transactions on Medical Imaging, 15 (4), p. 402–471 (1996).
F. Kruggel: Automatical adaption of anatomical masks to the neocortex. in: Computer Vision, Virtual Reality and Robotics in Medicine, Lecture Notes in Computer Science Vol. 905, p. 231–236, Springer 1995.
M.E. Brummer, R.M. Mersereau, R.L. Eisner, R.R.J Lewine: Automatic detection of brain contours in MRI data sets. IEEE Transactions on Medical Imaging 12 (2), p. 153–166 (1993).
J.F. Mangin, J. Regis, V. Frouin: Shape bottlenecks and conservative flow systems. in: Mathematical Methods in Biomedical Image Analysis, IEEE Press Washington, p. 319–328 (1996).
F. Kruggel, G. Lohmann: BRIAN (Brain Image Analysis) — A toolkit for the analysis of multimodal brain datasets. in: Computer Assisted Radiology, Elsevier Science BV p. 323–328, 1996.
S. Minoshima: Automated detection of the intercommisural (AC-PC) line for stereotactic localization of functional brain images. Journal of Nuclear Medicine 34, p. 322–329 (1993).
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© 1997 Springer-Verlag Berlin Heidelberg
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Kruggel, F., Lohmann, G. (1997). Automatical adaption of the stereotactical coordinate system in brain MRI datasets. In: Duncan, J., Gindi, G. (eds) Information Processing in Medical Imaging. IPMI 1997. Lecture Notes in Computer Science, vol 1230. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-63046-5_45
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DOI: https://doi.org/10.1007/3-540-63046-5_45
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