Skip to main content

Longitudinal and Multi-modal Data Learning via Joint Embedding and Sparse Regression for Parkinson’s Disease Diagnosis

  • Conference paper
  • First Online:
Machine Learning in Medical Imaging (MLMI 2018)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 11046))

Included in the following conference series:

Abstract

Parkinson’s disease (PD) is a neurodegenerative progressive disease that mainly affects the motor systems of patients. To slow this disease deterioration, robust and accurate diagnosis of PD is an effective way to alleviate mental and physical sufferings of clinical intervention. In this paper, we propose a new unsupervised feature selection method via joint embedding learning and sparse regression using longitudinal multi-modal neuroimaging data. Specifically, the proposed method performs feature selection and local structure learning, simultaneously, to adaptively determine the similarity matrix. Meanwhile, we constrain the similarity matrix to make it contains c connected components for gaining the most accurate information of the neuroimaging data structure. The baseline data is utilized to establish the feature selection model to select the most discriminative features. Namely, we exploit baseline data to train four regression models for the clinical scores prediction (depression, sleep, olfaction, and cognition scores) and a classification model for the classification of PD disease in the future time point. Extensive experiments are conducted to demonstrate the effectiveness of the proposed method on the Parkinson’s Progression Markers Initiative (PPMI) dataset. The experimental results demonstrate that, our proposed method can enhance the performance in clinical scores prediction and class label identification in longitudinal data and outperforms the state-of-art methods as well.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Kalia, L.V., Lang, A.E.: Parkinson’s disease. Lancet 386, 896–912 (2015)

    Article  Google Scholar 

  2. Lotharius, J., Brundin, P.: Pathogenesis of Parkinson’s disease: dopamine, vesicles and [alpha]-synuclein. Nat. Rev. Neurosci. 3, 932–942 (2002)

    Article  Google Scholar 

  3. Zhang, D., Shen, D.: Multi-modal multi-task learning for joint prediction of multiple regression and classification variables in Alzheimer’s disease. NeuroImage 59, 895–907 (2012)

    Article  Google Scholar 

  4. Nie, F., Zhu, W., Li, X.: Unsupervised feature selection with structured graph optimization. In: Proceedings of the Thirtieth AAAI Conference on Artificial Intelligence, pp. 1302–1308 (2016)

    Google Scholar 

  5. Zou, H., Hastie, T.: Regularization and variable selection via the elastic net. J. Roy. Stat. Soc. B 67, 301–320 (2005)

    Article  MathSciNet  Google Scholar 

  6. Lei, H., Huang, Z., Zhang, J., Yang, Z., et al.: Joint detection and clinical score prediction in Parkinson’s disease via multi-modal sparse learning. Expert. Syst. Appl. 80, 284–296 (2017)

    Article  Google Scholar 

  7. He, X., Cai, D., Niyogi, P.: Laplacian score for feature selection. In: Proceedings of the 18th International Conference on Neural Information Processing Systems, pp. 507–514 (2005)

    Google Scholar 

  8. Wang, S., Tang, J., Liu, H.: Embedded unsupervised feature selection. In: Proceedings of the Twenty-Ninth AAAI Conference on Artificial Intelligence, pp. 470–476 (2015)

    Google Scholar 

  9. Cai, D., Zhang, C., He, X.: Unsupervised feature selection for multi-cluster data. In: Proceedings of the 16th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, pp. 333–342 (2010)

    Google Scholar 

  10. Nie, F., Xu, D., Tsang, I.W.H., Zhang, C.: Flexible manifold embedding: a framework for semi-supervised and unsupervised dimension reduction. IEEE Trans. Image Process. 19, 1921–1932 (2010)

    Article  MathSciNet  Google Scholar 

  11. Shi, L., Du, L., Shen, Y.D.: Robust spectral learning for unsupervised feature selection. In: 2014 IEEE International Conference on Data Mining, pp. 977–982 (2014)

    Google Scholar 

  12. Fan, K.: On a theorem of Weyl concerning eigenvalues of linear transformations I. Proc. Natl. Acad. Sci. U.S.A. 35, 652–655 (1949)

    Article  MathSciNet  Google Scholar 

  13. Whitwell, J.L.: Voxel-based morphometry: an automated technique for assessing structural changes in the brain. J. Neurosci. 29, 9661–9664 (2009)

    Article  Google Scholar 

  14. Tzourio-Mazoyer, N., Landeau, B., Papathanassiou, D., Crivello, F., et al.: Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. NeuroImage 15, 273–289 (2002)

    Article  Google Scholar 

  15. Jenkinson, M., Beckmann, C.F., Behrens, T.E., Woolrich, M.W., Smith, S.M.: FSL. NeuroImage 62, 782–790 (2012)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Baiying Lei .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Lei, H., Huang, Z., Elazab, A., Li, H., Lei, B. (2018). Longitudinal and Multi-modal Data Learning via Joint Embedding and Sparse Regression for Parkinson’s Disease Diagnosis. In: Shi, Y., Suk, HI., Liu, M. (eds) Machine Learning in Medical Imaging. MLMI 2018. Lecture Notes in Computer Science(), vol 11046. Springer, Cham. https://doi.org/10.1007/978-3-030-00919-9_36

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-00919-9_36

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-00918-2

  • Online ISBN: 978-3-030-00919-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics