Abstract
The performance of collective operations has a large impact on overall performance in many HPC applications. Implementing multiple algorithms and selecting optimal one depending on message size and the number of processes involved in the operation is essential to achieve good performance. In this paper, we will present SHCOLL, a collective routines library that was developed on top of OpenSHMEM API point to point operations: puts, gets, atomic memory update, and memory synchronization routines. The library is designed to serve as a plug-in to OpenSHMEM implementations and will be used by the OSSS OpenSHMEM reference implementation to support OpenSHMEM collective operations. In this paper, we describe the algorithms that have been incorporated in the implementation of each OpenSHMEM API collective routine and evaluate them on a Cray XC30 system. For long messages, SHCOLL shows an improvement by up to a factor of 12 compared to the vendor’s implementation. We also discuss future development of the library, as well as how it will be incorporated into the OSSS OpenSHMEM reference implementation.
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Acknowledgments
This research was funded in part by the United States Department of Defense, and was supported by resources at Los Alamos National Laboratory. This publication has been approved for public, unlimited distribution by Los Alamos National Laboratory, with document number LA-UR-18-27273.
This research used resources of the National Energy Research Scientific Computing Center (NERSC), a U.S. Department of Energy Office of Science User Facility operated under Contract No. DE-AC02-05CH11231.
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Milaković, S., Budimlić, Z., Pritchard, H., Curtis, A., Chapman, B., Sarkar, V. (2019). SHCOLL - A Standalone Implementation of OpenSHMEM-Style Collectives API. In: Pophale, S., Imam, N., Aderholdt, F., Gorentla Venkata, M. (eds) OpenSHMEM and Related Technologies. OpenSHMEM in the Era of Extreme Heterogeneity. OpenSHMEM 2018. Lecture Notes in Computer Science(), vol 11283. Springer, Cham. https://doi.org/10.1007/978-3-030-04918-8_6
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