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Machine Learning and Feature Selection for the Classification of Mental Disorders from Methylation Data

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Artificial Intelligence in Medicine (AIME 2019)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 11526))

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Abstract

Psychiatric disorder diagnoses are heavily reliant on observable symptoms and clinical traits, the skill level of the physician, and the patient’s ability to verbalize experienced events. Therefore, researchers have sought to identify biological markers that accurately differentiate mental disorder subtypes from psychiatrically normal comparison subjects. One such putative biomarker, DNA methylation, has recently become more prevalent in genetic research studies in oncology. This paper proposes to apply this paradigm in a study of the diagnostic accuracy of DNA methylation signatures for classifying schizophrenia, bipolar disorder, and major depressive disorder. Very high classification performance measures were obtained from differentially methylated positions and regions, as well as from selected gene signatures. This work contributes to the path toward the identification of biological signatures for mental disorders.

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Acknowledgements

We thank the State University of New York EIPF grant #172 for their support of this work and Dr. Renaud Seigneuric for his advice.

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Correspondence to Christopher L. Bartlett .

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Bartlett, C.L., Glatt, S.J., Bichindaritz, I. (2019). Machine Learning and Feature Selection for the Classification of Mental Disorders from Methylation Data. In: Riaño, D., Wilk, S., ten Teije, A. (eds) Artificial Intelligence in Medicine. AIME 2019. Lecture Notes in Computer Science(), vol 11526. Springer, Cham. https://doi.org/10.1007/978-3-030-21642-9_40

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  • DOI: https://doi.org/10.1007/978-3-030-21642-9_40

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-21641-2

  • Online ISBN: 978-3-030-21642-9

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