Skip to main content

Estimating the Statistical Power of the Benjamini-Hochberg Procedure

  • Conference paper
  • First Online:
Book cover Advances in High Performance Computing (HPC 2019)

Abstract

In this work we investigate the properties of the statistical power of the Benjamini-Hochberg procedure. That procedure provides a widely used method for controlling the False Discovery Rate in a multiple comparison setup. We show that in many cases the statistical power of the p-values adjusted by the Benjamini-Hochberg procedure could be approximated by a normal distribution with both its mean and standard deviation having an exponential fit and convergence when the number of tests increase. As a result one could estimate the probability that the power belongs in a predetermined interval in a very computationally efficient way using only simulations for several values of the number of tests parameter. The fit for the mean also supports the conjecture that the power of the test decreases to the limit power, which is known to exist, when increasing the number of tests. The latter is a very favourable observation from practical perspective and we try to offer partially rigorous explanation why the monotonicity is present.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Atanassov, E., Gurov, T., Ivanovska, S., Karaivanova, A.: Parallel monte carlo on intel MIC architecture. Procedia Comput. Sci. 108, 1803–1810 (2017)

    Article  Google Scholar 

  2. Benjamini, Y., Hochberg, Y.: Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. Ser. B (Methodol.) 57(1), 289–300 (1995)

    MathSciNet  MATH  Google Scholar 

  3. Benjamini, Y., Yekutieli, D.: The control of the false discovery rate in multiple testing under dependency. The Annals of Statistics 29(4), 1165–1188 (2001)

    Article  MathSciNet  Google Scholar 

  4. Ferreira, J.A., Zwinderman, A.H.: On the Benjamini - Hochberg method. Ann. Statist. 34(4), 1827–1849 (2006)

    Article  MathSciNet  Google Scholar 

  5. Li, J., Witten, D.M., Johnstone, I.M., Tibshirani, R.: Normalization, testing, and false discovery rate estimation for RNA-sequencing data. Biostatistics 13(3), 523–538 (2012)

    Article  Google Scholar 

  6. Storey, J.D., Taylor, J.E., Siegmund, D.: Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: A unified approach. J. R. Stat. Soc. Ser. B (Stat. Methodol.) 66(1), 187–205 (2004)

    Article  MathSciNet  Google Scholar 

  7. Van Noorden, R., Maher, B., Nuzzo, R.: The top 100 papers. Nature 514(7524), 550–553 (2014)

    Article  Google Scholar 

Download references

Acknowledgements

This work has been supported by grant DN-02/13 (Modern mathematical methods for Big data) with Bulgarian NSF.

The extensive numerical calculations were performed on the HPC facility Avitohol of IICT-BAS, described in [1].

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Dean Palejev .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Palejev, D., Savov, M. (2021). Estimating the Statistical Power of the Benjamini-Hochberg Procedure. In: Dimov, I., Fidanova, S. (eds) Advances in High Performance Computing. HPC 2019. Studies in Computational Intelligence, vol 902. Springer, Cham. https://doi.org/10.1007/978-3-030-55347-0_26

Download citation

Publish with us

Policies and ethics