Abstract
Organic agriculture practices have the potential to improve soil fertility and biodiversity while ensuring a more sustainable development. However, given that no chemicals can be used in crop cultivation, fighting against harmful plant pests and diseases becomes an even greater challenge. According to the organic agriculture principles, prevention and avoidance constitute the first line of defense against pests and diseases. There are many guides, manuals and codes of practice available relating to all aspects of organic agriculture scattered throughout the Web. The challenge is providing farmers with the information that they need to confront potential risks, improve yields and reduce insect damage. Semantic technologies can be useful assisting in the process of data gathering, integration and exploitation to provide insightful recommendations. Ontologies constitute the necessary bedrock for Semantic Web-based applications to work properly. In this work, we describe the process to build an ontology to model the plant pests and diseases application domain. This ontology is expected to allow the development of a knowledge base to enable a decision support system for farmers interested in applying organic agriculture practices.
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References
Food and Agriculture Organization: How the world is fed. In: Agriculture, food and water (2003)
Drescher, L.S., Thiele, S., Mensink, G.B.M.: A new index to measure healthy food diversity better reflects a healthy diet than traditional measures. J. Nutr. 137, 647–651 (2007). https://doi.org/10.1093/jn/137.3.647
Fletcher, J., et al.: Emerging infectious plant diseases. In: Scheld, W.M., Grayson, M.L., Hughes, J.M. (eds.) Emerging Infections, pp. 337–366. ASM Press, Washington DC (2010)
Velásquez, A.C., Castroverde, C.D.M., Yang He, S.: Plant-pathogen warfare under changing climate conditions. Current Biol. 28, R619–R634 (2018). https://doi.org/10.1016/j.cub.2018.03.054
García-Sánchez, F., García-Díaz, J.A., Gómez-Berbís, J.M., Valencia-García, R.: Financial knowledge instantiation from semi-structured, heterogeneous data sources. In: Silhavy, R. (ed.) CSOC2018 2018. AISC, vol. 764, pp. 103–110. Springer, Cham (2019). https://doi.org/10.1007/978-3-319-91189-2_11
Prudhomme, C., Homburg, T., Ponciano, J.-J., Boochs, F., Cruz, C., Roxin, A.-M.: Interpretation and automatic integration of geospatial data into the Semantic Web. Computing 102(2), 365–391 (2019). https://doi.org/10.1007/s00607-019-00701-y
Bernabé-Díaz, J.A., Legaz-García, M. del C., García, J.M., Fernández-Breis, J.T.: Efficient, semantics-rich transformation and integration of large datasets. Expert Syst. Appl. 133, 198–214 (2019). https://doi.org/10.1016/j.eswa.2019.05.010
Studer, R., Benjamins, R., Fensel, D.: Knowledge engineering: Principles and methods. Data Knowl. Eng. 25, 161–197 (1998). https://doi.org/10.1016/S0169-023X(97)00056-6
Drury, B., Fernandes, R., Moura, M.-F., Andrade Lopes, A.: A Survey of Semantic Web Technology for Agriculture. Information Processing in Agriculture. 1–15 (2019). https://doi.org/10.1016/J.INPA.2019.02.001
Lagos-Ortiz, K., Salas-Zárate, M. del P., Paredes-Valverde, M.A., García-Díaz, J.A., Valencia-García, R.: AgriEnt: A knowledge-based web platform for managing insect pests of field crops. Appl. Sci. 10, 1040 (2020). https://doi.org/10.3390/app10031040
Xiaoxue, L., Xuesong, B., Longhe, W., Bingyuan, R., Shuhan, L., Lin, L.: Review and trend analysis of knowledge graphs for crop pest and diseases. IEEE Access. 7, 62251–62264 (2019). https://doi.org/10.1109/ACCESS.2019.2915987
Garcerán-Sáez, J., García-Sánchez, F.: SePeRe: Semantically-enhanced system for pest recognition. In: Valencia-García, R., Alcaraz-Mármol, G., Cioppo-Morstadt, Jd, Vera-Lucio, N., Bucaram-Leverone, M. (eds.) CITAMA2019 2019. AISC, vol. 901, pp. 3–11. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-10728-4_1
Hernández-Castillo, C., Guedea-Noriega, H.H., Rodríguez-García, M.Á., García-Sánchez, F.: Pest recognition using natural language processing. In: Valencia-García, R., Alcaraz-Mármol, G., Del Cioppo-Morstadt, J., Vera-Lucio, N., Bucaram-Leverone, M. (eds.) CITI 2019. CCIS, vol. 1124, pp. 3–16. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-34989-9_1
Labaña, F.M., Ruiz, A., García-Sánchez, F.: PestDetect: Pest recognition using convolutional neural network. In: Valencia-García, R., Alcaraz-Mármol, G., Cioppo-Morstadt, Jd, Vera-Lucio, N., Bucaram-Leverone, M. (eds.) CITAMA2019 2019. AISC, vol. 901, pp. 99–108. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-10728-4_11
Martinelli, F., Scalenghe, R., Davino, S., Panno, S., Scuderi, G., Ruisi, P., Villa, P., Stroppiana, D., Boschetti, M., Goulart, L.R.: Advanced methods of plant disease detection. A review. Agron. Sustain. Dev. 35, 1–25 (2015). https://doi.org/10.1007/s13593-014-0246-1ï
Jonquet, C., Toulet, A., Arnaud, E., Aubin, S., Dzalé Yeumo, E., Emonet, V., Graybeal, J., Laporte, M.-A., Musen, M.A., Pesce, V., Larmande, P.: AgroPortal: A vocabulary and ontology repository for agronomy. Comput. Electron. Agric. 144, 126–143 (2018). https://doi.org/10.1016/j.compag.2017.10.012
Rodríguez Iglesias, A., Egaña Aranguren, M., Rodríguez González, A., Wilkinson, M.D.: Plant-pathogen interactions ontology (PPIO). In: Rojas, I., Ortuño Guzman, F.M. (eds.) International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2013, Granada, Spain, March 18–20, 2013, Proceedings, pp. 695–702. Copicentro Editorial, Granada, Spain (2013)
Walls, R., Smith, B., Elser, J., Goldfain, A., Stevenson, D.W., Jaiswal, P.: A plant disease extension of the Infectious Disease Ontology. In: Cornet, R., Stevens, R. (eds.) Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), KR-MED Series, pp. 1–5. CEUR-WS.org, Graz, Austria (2012)
Ontology Best Practices - OSF Wiki. https://wiki.opensemanticframework.org/index.php/Ontology_Best_Practices, last accessed 03/28/2020
Dalvi, P., Mandave, V., Gothkhindi, M., Patil, A., Kadam, S., Pawar, S.S.: Overview of agriculture domain ontologies. Int. J. Recent Adv. Eng. Technol. 4, 5–9 (2016)
Xiaoxue, L., Xuesong, B., Longhe, W., Bingyuan, R., Shuhan, L., Lin, L.: Review and trend analysis of knowledge graphs for crop pest and diseases. IEEE Access. 7, 62251–62264 (2019). https://doi.org/10.1109/ACCESS.2019.2915987
Devare, M., Aubert, C., Laporte, M.-A., Valette, L., Arnaud, E., Buttigieg, P.L.: Data-driven agricultural research for development a need for data harmonization via semantics. In: Jaiswal, P., Hoehndorf, R., Arighi, C.N., and Meier, A. (eds.) Proceedings of the Joint International Conference on Biological Ontology and BioCreative, CEUR Workshop Proceedings 1747. CEUR-WS.org, Corvallis, Oregon, United States (2016). https://doi.org/10.1186/2041-1480-4-43
Caracciolo, C., Stellato, A., Morshed, A., Johannsen, G., Rajbhandari, S., Jaques, Y., Keizer, J.: The AGROVOC linked dataset. Semant. Web 4, 341–348 (2013). https://doi.org/10.3233/SW-130106
Beck, H.W., Kim, S., Hagan, D.: A Crop-pest ontology for extension publications. In: 2005 EFITA/WCCA Joint Congress on IT in Agriculture, pp. 1169–1176, Vila Real, Portugal (2005)
Lacasta, J., Lopez-Pellicer, F.J., Espejo-García, B., Nogueras-Iso, J., Zarazaga-Soria, F.J.: Agricultural recommendation system for crop protection. Comput. Electron. Agric. 152, 82–89 (2018). https://doi.org/10.1016/j.compag.2018.06.049
Jearanaiwongkul, W., Anutariya, C., Andres, F.: An ontology-based approach to plant disease identification system. In: Proceedings of the 10th International Conference on Advances in Information Technology - IAIT 2018, pp. 1–8. ACM Press, New York (2018). https://doi.org/10.1145/3291280.3291786
Noy, N.F., McGuinness, D.L.: Ontology Development 101: A Guide to Creating Your First Ontology (2001)
Cristani, M., Cuel, R.: A survey on ontology creation methodologies. In: Sheth, A.P., Lytras, M.D. (eds.) Semantic Web-Based Information Systems: State-of-the-Art Applications, pp. 98–122. IGI Global (2007). https://doi.org/10.4018/978-1-59904-426-2.ch004
Organic farming|European Commission. https://ec.europa.eu/info/food-farming-fisheries/farming/organic-farming/. Accessed 28 Mar 2020
Nicolopoulou-Stamati, P., Maipas, S., Kotampasi, C., Stamatis, P., Hens, L.: Chemical pesticides and human health: The urgent need for a new concept in agriculture. Front. Public Health. 4 (2016). https://doi.org/10.3389/fpubh.2016.00148
García-Sánchez, F., Colomo-Palacios, R., Valencia-García, R.: A social-semantic recommender system for advertisements. Inf. Process. Manage. 57, 102153 (2020). https://doi.org/10.1016/J.IPM.2019.102153
Goldstein, A., Fink, L., Ravid, G.: A Framework for Evaluating Agricultural Ontologies (2019). https://arxiv.org/abs/1906.10450
Acknowledgements
This work has been partially supported by the Seneca Foundation-the Regional Agency for Science and Technology of Murcia (Spain)-through project 20963/PI/18, the Spanish National Research Agency (AEI) and the European Regional Development Fund (FEDER/ERDF) through projects KBS4FIA (TIN2016-76323-R) and LaTe4PSP (PID2019-107652RB-I00), Research Talent Attraction Program by the Comunidad de Madrid with grants references 2017-T2/TIC-5664, and Young Researchers R+D Project. Ref. M2173 – SGTRS (co-funded by Rey Juan Carlos University).
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Rodríguez-García, M.Á., García-Sánchez, F. (2020). CropPestO: An Ontology Model for Identifying and Managing Plant Pests and Diseases. In: Valencia-García, R., Alcaraz-Marmol, G., Del Cioppo-Morstadt, J., Vera-Lucio, N., Bucaram-Leverone, M. (eds) Technologies and Innovation. CITI 2020. Communications in Computer and Information Science, vol 1309. Springer, Cham. https://doi.org/10.1007/978-3-030-62015-8_2
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