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On Graph Extraction from Image Data

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Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 8609))

Abstract

Hot topics in knowledge discovery and interactive data mining from natural images include the application of topological methods and machine learning algorithms. For any such approach one needs at first a relevant and robust digital content representation from the image data. However, traditional pixel-based image analysis techniques do not effectively extract, hence represent the content. A very promising approach is to extract graphs from images, which is not an easy task. In this paper we present a novel approach for knowledge discovery by extracting graph structures from natural image data. For this purpose, we created a framework built upon modern Web technologies, utilizing HTML canvas and pure Javascript inside a Web-browser, which is a very promising engineering approach. Following on a short description of some popular image classification and segmentation methodologies, we outline a specific data processing pipeline suitable for carrying out future scientific research. A demonstration of our implementation, compared to the results of a traditional watershed transformation performed in Matlab showed very promising results in both quality and runtime, despite some open problems. Finally, we provide a short discussion of a few open problems and outline some of our future research routes.

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References

  1. Holzinger, A., Dehmer, M., Jurisica, I.: Knowledge discovery and interactive data mining in bioinformatics state-of-the-art, future challenges and research directions. BMC Bioinformatics 15(suppl. 6), S1 (2014)

    Google Scholar 

  2. Bunke, H.: Graph-based tools for data mining and machine learning. In: Perner, P., Rosenfeld, A. (eds.) MLDM 2003. LNCS, vol. 2734, pp. 7–19. Springer, Heidelberg (2003)

    Chapter  Google Scholar 

  3. Strogatz, S.: Exploring complex networks. Nature 410, 268–276 (2001)

    Article  Google Scholar 

  4. Dehmer, M., Emmert-Streib, F., Mehler, A.: Towards an Information Theory of Complex Networks: Statistical Methods and Applications. Birkhaeuser, Boston (2011)

    Book  Google Scholar 

  5. Holzinger, A.: On topological data mining. In: Holzinger, A., Jurisica, I. (eds.) Interactive Knowledge Discovery and Data Mining in Biomedical Informatics. LNCS, vol. 8401, pp. 331–356. Springer, Heidelberg (2014)

    Chapter  Google Scholar 

  6. Holzinger, K., Palade, V., Rabadan, R., Holzinger, A.: Darwin or lamarck? future challenges in evolutionary algorithms for knowledge discovery and data mining. In: Holzinger, A., Jurisica, I. (eds.) Interactive Knowledge Discovery and Data Mining in Biomedical Informatics. LNCS, vol. 8401, pp. 35–56. Springer, Heidelberg (2014)

    Chapter  Google Scholar 

  7. Holzinger, A., Blanchard, D., Bloice, M., Holzinger, K., Palade, V., Rabadan, R.: Darwin, lamarck, or baldwin: Applying evolutionary algorithms to machine learning techniques. In: The 2014 IEEE/WIC/ACM International Conference on Web Intelligence (WI 2014). IEEE (in print, 2014)

    Google Scholar 

  8. Holzinger, A., Jurisica, I.: Knowledge discovery and data mining in biomedical informatics: The future is in integrative, interactive machine learning solutions. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 1–18. Springer, Heidelberg (2014)

    Google Scholar 

  9. Otasek, D., Pastrello, C., Holzinger, A., Jurisica, I.: Visual data mining: Effective exploration of the biological universe. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 19–33. Springer, Heidelberg (2014)

    Google Scholar 

  10. Albert, R., Barabási, A.L.: Statistical mechanics of complex networks. Reviews of Modern Physics 74, 47–97 (2002)

    Article  MATH  MathSciNet  Google Scholar 

  11. Makrogiannis, S., Economou, G., Fotopoulos, S., Bourbakis, N.G.: Segmentation of color images using multiscale clustering and graph theoretic region synthesis. IEEE Transactions on Systems Man and Cybernetics Part A: Systems and Humans 35, 224–238 (2005)

    Article  Google Scholar 

  12. Kropatsch, W.G., Burge, M., Glantz, R.: Graphs in image analysis. In: Kropatsch, W.G., Bischof, H. (eds.) Digital Image Analysis, pp. 179–197. Springer, New York (2001)

    Chapter  Google Scholar 

  13. Caselles, V., Coll, B., Morel, J.M.: Topographic maps and local contrast changes in natural images. International Journal of Computer Vision 33, 5–27 (1999)

    Article  Google Scholar 

  14. Ahammer, H., Kröpfl, J.M., Hackl, C., Sedivy, R.: Image statistics and data mining of anal intraepithelial neoplasia. Pattern Recognition Letters 29, 2189–2196 (2008)

    Article  Google Scholar 

  15. Vincent, L., Soille, P.: Watersheds in digital spaces: an efficient algorithm based on immersion simulations. IEEE Transactions on Pattern Analysis and Machine Intelligence 13, 583–598 (1991)

    Article  Google Scholar 

  16. Straehle, C., Peter, S., Köthe, U., Hamprecht, F.A.: K-smallest spanning tree segmentations. In: Weickert, J., Hein, M., Schiele, B. (eds.) GCPR 2013. LNCS, vol. 8142, pp. 375–384. Springer, Heidelberg (2013)

    Chapter  Google Scholar 

  17. Felzenszwalb, P.F., Huttenlocher, D.P.: Efficient graph-based image segmentation. International Journal of Computer Vision 59, 167–181 (2004)

    Article  Google Scholar 

  18. Lee, Y.J., Grauman, K.: Object-graphs for context-aware visual category discovery. IEEE Transactions on Pattern Analysis and Machine Intelligence 34, 346–358 (2012)

    Article  Google Scholar 

  19. Meyer, F.: Topographic distance and watershed lines. Signal Processing 38, 113–125 (1994)

    Article  MATH  Google Scholar 

  20. Holzinger, A., Malle, B., Bloice, M., Wiltgen, M., Ferri, M., Stanganelli, I., Hofmann-Wellenhof, R.: On the generation of point cloud data sets: Step one in the knowledge discovery process. In: Holzinger, A., Jurisica, I. (eds.) Knowledge Discovery and Data Mining. LNCS, vol. 8401, pp. 57–80. Springer, Heidelberg (2014)

    Google Scholar 

  21. Preuß, M., Dehmer, M., Pickl, S., Holzinger, A.: On terrain coverage optimization by using a network approach for universal graph-based data mining and knowledge discovery. In: Slezak, D., Peters, J.F., Ah-Hwee, T., Schwabe, L. (eds.) Brain Informatics and Health. LNCS (LNAI), vol. 8609, pp. 569–578. Springer, Heidelberg (2014)

    Google Scholar 

  22. Olfati-Saber, R., Fax, J.A., Murray, R.M.: Consensus and cooperation in networked multi-agent systems. Proceedings of the IEEE 95, 215–233 (2007)

    Article  Google Scholar 

  23. Wagner, I., Bruckstein, A.: From ants to a(ge)nts: A special issue on ant-robotics. Annals of Mathematics and Artificial Intelligence 31, 1–5 (2001)

    Article  Google Scholar 

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Holzinger, A., Malle, B., Giuliani, N. (2014). On Graph Extraction from Image Data. In: Ślȩzak, D., Tan, AH., Peters, J.F., Schwabe, L. (eds) Brain Informatics and Health. BIH 2014. Lecture Notes in Computer Science(), vol 8609. Springer, Cham. https://doi.org/10.1007/978-3-319-09891-3_50

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  • DOI: https://doi.org/10.1007/978-3-319-09891-3_50

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-09890-6

  • Online ISBN: 978-3-319-09891-3

  • eBook Packages: Computer ScienceComputer Science (R0)

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