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Combined Language Processing Methods and Mash-Up System for Improving Retrieval in Diabetes Related Patents

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Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 8849))

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Abstract

This paper describes a prototype medical patent search system based on combined language processing methods. The fine tuning and customization of the system developed is directed towards diabetes centered drugs. The system incorporates combined methods for improving patents searching and ranking of the retrieved data. The paper presents a detailed scheme of the system along with all processing steps (NLP processing, structural and textual indexing, clustering, patent decomposition, query processing, reordering retrieval results). As a main contribution of the work, a mashed system composed of several services for refinement of searching diabetes related patents is built on top of these methods that will aid individuals; medical personal or pharmaceutical companies refine the complex task of searching diabetes related patents.

The evaluation showed that using composed search from document sections resulted in a higher total similarity measure. The Quality of Experience (QoE) evaluation showed a very positive level of user satisfaction.

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References

  1. Nichols, C., Hahn, R., Nadershahi, A., Jones, K.: A systematic commercialization approach for academically developed biomedical innovations. In: 2012 Pan American Health Care Exchanges (PAHCE), March 26-31, p. 18 (2012)

    Google Scholar 

  2. International Diabetes Federation (March 23, 2014), http://www.idf.org

  3. Cohen, D.: The Prickly Problem of Access to Insulin. BMJ: British Medical Journal (Overseas & Retired Doctors Edition) 343(7823), 562–565 (2011)

    Google Scholar 

  4. Patent Pools (March 23, 2014), http://www.uspto.gov/web/offices/pac/dapp/opla/patentpool.pdf

  5. Jamshed, S., Babar, Z.U.D., Ibrahim, M.I.M., Hassali, M.A.A.: Generic medicines as a way to improve access and affordability: A proposed framework for Pakistan. Journal of Clinical and Diagnostic Research 3, 1596–1600 (2009)

    Google Scholar 

  6. Dubey, J., Dubey, R.: Pharmaceutical innovation and generic challenge: Recent trends and causal factors. International Journal of Pharmaceutical and Healthcare Marketing: IJPHM 4(2), 175–190 (2010)

    Article  Google Scholar 

  7. FDA Orange Book (April 23, 2014), http://www.accessdata.fda.gov/scripts/cder/ob/default.cfm

  8. Galvez, C.: Identifying and annotating generic drug names. In: 2012 7th Iberian Conference on Information Systems and Technologies (CISTI), June 20-23, pp. 1–6 (2012)

    Google Scholar 

  9. Patent Search and Analytics, http://www.pantrosip.com/ (accessed March 23, 2014)

  10. Matheo Patent Search, http://www.imcsline.com (accessed March 23, 2014)

  11. [EPO] European Patent Office, http://www.epo.org (accessed March 23, 2014)

  12. [WIPO] World Intellectual Property Organization, http://www.wipo.int/patentscope/en/ (accessed March 23, 2014)

  13. [USPTO] The United States Patent and Trademark Office, http://www.uspto.gov (accessed March 23, 2014)

  14. [Salampasis 2014], http://www.perfedpat.eu/ (accessed June 21, 2014)

  15. Mukherjea, S., Bamba, B., Kankar, P.: Information Retrieval and Knowledge Discovery Utilizing a BioMedical Patent Semantic Web. IEEE Transactions on Knowledge and Data Engineering 17(8), 1099–1110 (2005)

    Article  Google Scholar 

  16. Aleman-Meza, B., Arpinar, I.B., Nural, M.V., Sheth, A.P.: Ranking Documents Semantically Using Ontological Relationships. In: IEEE Fourth International Conference on Semantic Computing (ICSC), September 22-24, pp. 299–304 (2010)

    Google Scholar 

  17. Ghoula, N., Khelif, K., Dieng-Kuntz, R.: Supporting Patent Mining by using Ontology-based Semantic Annotations. In: Proceedings of the IEEE/WIC/ACM International Conference on Web Intelligence, Washington, DC, pp. 435–438 (2007)

    Google Scholar 

  18. Segev, A., Kantola, J.: Patent Search Decision Support Service. In: Seventh Inter. Conf. on Information Technology: New Generations (ITNG), April 12-14, pp. 568–573 (2010)

    Google Scholar 

  19. Boshnakoska, D., Chorbev, I., Davcev, D.: Ontology supported patent search architecture with natural language analysis and fuzzy rules. In: Markovski, S., Gushev, M. (eds.) ICT Innovations 2012. AISC, vol. 207, pp. 275–284. Springer, Heidelberg (2013)

    Chapter  Google Scholar 

  20. Taduri, S., Lau, G.T., Law, K.H., Kesan, J.P.: Retrieval of Patent Documents from Heterogeneous Sources Using Ontologies and Similarity Analysis. In: Fifth IEEE International Conference on Semantic Computing, pp. 1–8 (2011)

    Google Scholar 

  21. Bashir, S., Rauber, A.: Improving Retrievability of Patents in Prior-Art Search. In: Gurrin, C., He, Y., Kazai, G., Kruschwitz, U., Little, S., Roelleke, T., Rüger, S., van Rijsbergen, K. (eds.) ECIR 2010. LNCS, vol. 5993, pp. 457–470. Springer, Heidelberg (2010)

    Chapter  Google Scholar 

  22. Zhai, D., Chen, L., Wang, L.: Research on patent information retrieval based on ontology and its application. In: 2010 Second Pacific-Asia Conference on Circuits, Communications and System (PACCS), August 1-2, vol. 1, pp. 199–202 (2010)

    Google Scholar 

  23. Preschitschek, N., Niemann, H., Moehrle, M.G., Leker, J.: Semantic analyses vs. IPC co-classification analyses of patents: Which one better serves to anticipate converging industries? In: 2012 Proceedings of PICMET 2012: Technology Management for Emerging Technologies (PICMET), July 29-August 2, pp. 566–578 (2012)

    Google Scholar 

  24. World Health Organization Global Strategy Plan (March 23, 2014), http://www.who.int/phi/publications/Global_Strategy_Plan_Action.pdf

  25. Longo, C.J.: Encouraging pharmaceutical innovation to meet the needs of both developed and developing countries. International Journal of Development Issues 10(1), 92–101 (2011)

    Article  Google Scholar 

  26. Medicines Patent Pool, http://www.medicinespatentpool.org (accessed March 23, 2013)

  27. Hoen, E’., Berger, J., Calmy, A., Moon, S.: Driving a decade of change: HIV/AIDS, patents and access to medicines for all. The Journal of the International AIDS Society (2011)

    Google Scholar 

  28. Moszynski, P.: HIV drug patent pool offers hope of cheap drugs to millions. BMJ: British Medical Journal (Overseas & Retired Doctors Edition) 339(7735), 14 (2010)

    Google Scholar 

  29. Pool for Open Innovation, http://www.alnylam.com/About-Alnylam/Social-Leadership/Patent-Pool.php (accessed March 23, 2014)

  30. Songthung, P., Sripanidkulchai, K., Luangruangrong, P., Sakulbumrungsil, R.C., Udomaksorn, S., Kessomboon, N., Kanchanaphibool, I.: An Innovative Decision Support Service for Improving Pharmaceutical Acquisition Capabilities. In: 2012 Annual on SRII Global Conference (SRII), July 24-27, pp. 628–636 (2012)

    Google Scholar 

  31. WIPO Re: Search, http://www.wipo.int/research/en/search/introduction.html (March 23, 2014)

  32. Taghaboni-Dutta, F., Trappey, A., Trappey, C., Wu, H.Y.: An exploratory RFID patent analysis. Management Research News 32(12), 1163–1176

    Google Scholar 

  33. Wu, J.-l., Wang, H.-Q.: Study on operation modes and implementation tactics of patent pool. In: 2011 International Conference on Management Science and Industrial Engineering (MSIE), January 8-11, pp. 646–649 (2011)

    Google Scholar 

  34. Zhang, T., Jiang, N.: Identification of antitrust legal risk of patent pool by the method of structural equation model. In: 2012 9th International Conference on Service Systems and Service Management (ICSSSM), July 2-4, pp. 405–408 (2012)

    Google Scholar 

  35. Akay, A., Dragomir, A., Erlandsson, B.-E.: A novel data-mining approach leveraging social media to monitor and respond to outcomes of diabetes drugs and treatment. In: 2013 IEEE Point-of-Care Healthcare Technologies (PHT), January 16-18, pp. 264–266 (2013)

    Google Scholar 

  36. Marec Data Set, http://www.ifs.tuwien.ac.at/imp/marec.shtml (accessed March 23, 2014)

  37. Sharp NLP Project, http://sharpnlp.codeplex.com (accessed March 23, 2014)

  38. OpenNLP, http://opennlp.apache.org (accessed March 23, 2014)

  39. Miller, G.A.: WordNet: A Lexical Database for English. Communications of the ACM 38(11), 39–41 (1995)

    Article  Google Scholar 

  40. WordNet Project, http://www.codeproject.com/Articles/11835/WordNet-based-semantic-similarity-measurement (accessed March 23, 2014)

  41. DailyMed, http://dailymed.nlm.nih.gov/dailymed (accessed March 23, 2014)

  42. DrugBank, www.drugbank.ca (accessed March 23, 2014)

  43. Herrmann, M.: Monopoly pricing of an antibiotic subject to bacterial resistance. Journal of Health Economics 29(1), 137–150 (2010)

    Article  Google Scholar 

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Chorbev, I., Davcev, D., Boshnakoska, D. (2014). Combined Language Processing Methods and Mash-Up System for Improving Retrieval in Diabetes Related Patents. In: Lamas, D., Buitelaar, P. (eds) Multidisciplinary Information Retrieval. IRFC 2014. Lecture Notes in Computer Science, vol 8849. Springer, Cham. https://doi.org/10.1007/978-3-319-12979-2_2

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  • DOI: https://doi.org/10.1007/978-3-319-12979-2_2

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-12978-5

  • Online ISBN: 978-3-319-12979-2

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