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Automatic Segmentation and Quantitative Analysis of Gray Matter on MR Images of Patients with Epilepsy Based on Unsupervised Learning Methods

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Trends and Applications in Knowledge Discovery and Data Mining (PAKDD 2014)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 8643))

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Abstract

The quantitative analysis of volume information about gray matter (GM) on magnetic resonance (MR) images is important in both research and clinical diagnosis of patients with epilepsy. In this paper, a k-means method and an expectation maximization algorithm are implemented respectively to achieve segmentation of GM on MR images at the transverse and coronal plane. The experiments were performed on both multi-modal and mono-modal MR images and the similarity index values for the accuracy of automatic segmentation with manual segmentation were consistently high for patients with epilepsy (transverse plane: 0.806; coronal plane: 0.837). The results demonstrated that the automatic segmentation methods implemented in this paper are accurate and efficient to realize extraction of GM of patients with epilepsy in both transverse and coronal plane.

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References

  1. Banerjee, P.N., Filippi, D., Allen Hauser, W.: The descriptive epidemiology of epilepsy—a review. Epilepsy Res. 85(1), 31–45 (2009)

    Article  Google Scholar 

  2. Bonilha, L., Edwards, J.C., Kinsman, S.L., et al.: Extrahippocampal gray matter loss and hippocampal deafferentation in patients with temporal lobe epilepsy. Epilepsia 51(4), 519–528 (2010)

    Article  Google Scholar 

  3. Balafar, M.A., Ramli, A.R., Saripan, M.I., Mashohor, S.: Review of brain MRI image segmentation methods. Artif. Intell. Rev. 33(3), 261–274 (2010)

    Article  Google Scholar 

  4. Zhang, Y., Brady, M., Smith, S.: Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm. IEEE Trans. Biomed. Imaging 20(1), 45–57 (2001)

    Article  Google Scholar 

  5. Sled, J.G., Zijdenbos, A.P., Evans, A.C.: A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans. Med. Imaging 17(1), 87–97 (1998)

    Article  Google Scholar 

  6. Zitova, B., Flusser, J.: Image registration methods: a survey. Image Vis. Comput. 21(11), 977–1000 (2003)

    Article  Google Scholar 

  7. Smith, S.M.: Fast robust automated brain extraction. Hum. Brain Mapp. 17(3), 143–155 (2002)

    Article  Google Scholar 

  8. Moftah, H.M., Azar, A.T., Al-Shammari, E.T., Ghali, N.I., Hassanien, A.E., Shoman, M.: Adaptive k-means clustering algorithm for MR breast image segmentation. Neural Comput. Appl. 24, 1917–1928 (2014)

    Article  Google Scholar 

  9. Shiee, N., Bazin, P.-L., Cuzzocreo, J.L., Blitz, A., Pham, D.L.: Segmentation of brain images using adaptive atlases with application to ventriculomegaly. In: Székely, G., Hahn, H.K. (eds.) IPMI 2011. LNCS, vol. 6801, pp. 1–12. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  10. Anbeek, P., Vincken, K.L., van Osch, M.J., Bisschops, R.H., van der Grond, J.: Probabilistic segmentation of white matter lesions in MR imaging. NeuroImage 21(3), 1037–1044 (2004)

    Article  Google Scholar 

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Acknowledgement

This research is supported by, National Basic Research Program of China (973 Program, No. 2010CB732506), NSFC (No. 81301213), NSFC (No. 81000609), NSFC (No. 60972110), and Major Scientific Project of Social Science Foundation of China (No. 11&ZD174). The authors would like to thank Dr. He Wang in Philips Healthcare, China for his help on MR.

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Correspondence to Jing Ding or Su Zhang .

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© 2014 Springer International Publishing Switzerland

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Wang, R., Wang, J., Ding, J., Zhang, S. (2014). Automatic Segmentation and Quantitative Analysis of Gray Matter on MR Images of Patients with Epilepsy Based on Unsupervised Learning Methods. In: Peng, WC., et al. Trends and Applications in Knowledge Discovery and Data Mining. PAKDD 2014. Lecture Notes in Computer Science(), vol 8643. Springer, Cham. https://doi.org/10.1007/978-3-319-13186-3_54

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  • DOI: https://doi.org/10.1007/978-3-319-13186-3_54

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-13185-6

  • Online ISBN: 978-3-319-13186-3

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