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Automatic Ischemic Stroke Lesion Segmentation in Multi-spectral MRI Images Using Random Forests Classifier

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Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries (BrainLes 2015)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 9556))

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Abstract

This paper presents an automated segmentation framework for ischemic stroke lesion segmentation in multi-spectral MRI images. The framework is based on a random forests (RF), which is an ensemble learning technique that generates several classifiers and combines their results in order to make decisions. In RF, we employ several meaningful features such as intensities, entropy, gradient etc. to classify the voxels in multi-spectral MRI images. The segmentation framework is validated on both training and testing data, obtained from MICCAI ISLES-2015 SISS challenge dataset. The performance of the framework is evaluated relative to the manual segmentation (ground truth). The experimental results demonstrate the robustness of the segmentation framework, and that it achieves reasonable segmentation accuracy for segmenting the sub-acute ischemic stroke lesion in multi-spectral MRI images.

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References

  1. The Atlas of Heart Disease and Stroke. http://www.who.int/cardiovascular_diseases/resources/atlas/en/

  2. Fassbender, K., Balucani, C., Walter, S., Levine, S.R., Haass, A., Grotta, J.: Streamlining of prehospital stroke management: the golden hour. Lancet Neurol. 12, 585–596 (2013)

    Article  Google Scholar 

  3. Burns, J.D., Green, D.M., Metivier, K., DeFusco, C.: Intensive care management of acute ischemic stroke. Emerg. Med. Clin. North Am. 30, 713–744 (2012)

    Article  Google Scholar 

  4. Feigin, V.L., Lawes, C.M., Bennett, D.A., Barker-Collo, S.L., Parag, V.: Worldwide stroke incidence and early case fatality reported in 56 population-based studies: a systematic review. Lancet Neurol. 8, 355–369 (2009)

    Article  Google Scholar 

  5. Ball Jr., J.B., Pensak, M.L.: Fundamentals of magnetic resonance imaging. Am. J Otol. 8, 81–85 (1987)

    Google Scholar 

  6. Oskar, M., Matthias, W., von der Janina, G., Ulrike, M.K., Thomas, F.M., Heinz, H.: Extra Tree forests for sub-acute ischemic stroke lesion segmentation in MR sequences. J. Neurosci. Methods 240, 89–100 (2014)

    Google Scholar 

  7. Rekik, I., Allassonniere, S., Carpenter, T.K., Wardlaw, J.M.: Medical image analysis methods in MR/CT-imaged acute-subacute ischemic stroke lesion: segmentation, prediction and insights into dynamic evolution simulation models. a critical appraisal. NeuroImage: Clin. 1, 164–178 (2012)

    Article  Google Scholar 

  8. Mitra, J., Bourgeat, P., Fripp, J., Ghose, S., et al.: Lesion segmentation from multimodal MRI using random forests following ischemic stroke. NeuroImage 98, 324–335 (2014)

    Article  Google Scholar 

  9. Breiman, L.: Random forests. Mach. Learn. 45(1), 5–32 (2001)

    Article  MathSciNet  MATH  Google Scholar 

  10. Sled, J.G., Zijdenbos, A.P., Evans, A.C.: A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans. Med. Imaging 17, 87–97 (1998)

    Article  Google Scholar 

  11. Criminisi, A., Shotton, J. (eds.): Decision Forests for Computer Vision and Medical Image Analysis. Advances in Computer Vision and Pattern Recognition. Springer, Heidelberg (2013)

    Google Scholar 

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Correspondence to Qaiser Mahmood .

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Mahmood, Q., Basit, A. (2016). Automatic Ischemic Stroke Lesion Segmentation in Multi-spectral MRI Images Using Random Forests Classifier. In: Crimi, A., Menze, B., Maier, O., Reyes, M., Handels, H. (eds) Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries. BrainLes 2015. Lecture Notes in Computer Science(), vol 9556. Springer, Cham. https://doi.org/10.1007/978-3-319-30858-6_23

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  • DOI: https://doi.org/10.1007/978-3-319-30858-6_23

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-30857-9

  • Online ISBN: 978-3-319-30858-6

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