Abstract
With the development of advanced image acquisition and processing techniques providing better biomarkers for the characterization of brain diseases, the automatic analysis of biomedical imaging constitutes a critical point. In particular, analysis of complex data structure is a challenge for better understanding complex brain pathologies like multiple sclerosis (MS).
In this work, we describe a new fully automated method based on non-negative tensor factorization (NTF) to analyze white matter (WM) fiber-bundles. This method allows to extract, from a WM fiber-bundle, the set of fibers affected by the pathology, discriminating fibers affected by the pathological from the healthy fibers.
Our method was validated on simulated data and also applied on real MS patients. Results show the high precision level of our method to extract fibers affected by the pathological process.
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References
Arthur, D., Vassilvitskii, S.: k-means++: The advantages of careful seeding. In: Proceedings of the Eighteenth Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 1027–1035 (2007)
Cichocki, A., Zdunek, R., Phan, A.H., Amari, S.I.: Nonnegative Matrix and Tensor Factorizations: Applications to Exploratory Multi-way Data Analysis and Blind Source Separation. Wiley, Chichester (2009)
Colby, J.B., Soderberg, L., Lebel, C., Dinov, I.D., Thompson, P.M., Sowell, E.R.: Along-tract statistics allow for enhanced tractography analysis. Neuroimage 59(4), 3227–3242 (2012)
Halandur Nagaraja, B., Sima, D., Sauwen, N., Himmelreich, U., De Lathauwer, L., Van Huffel, S.: Tensor based tumor tissue type differentiation using magnetic resonance spectroscopic imaging. In: Annual International Conference of the IEEE, EMBC, pp. 7003–7006 (2015)
Hua, K., Zhang, J., Wakana, S., Jiang, H., Li, X., Reich, D.S., Calabresi, P.A., Pekar, J.J., van Zijl, P.C.M., Mori, S.: Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification. Neuroimage 39(1), 336–347 (2008)
MacQueen, J.: Some methods for classification and analysis of multivariate observations. In: Proceedings of the Fifth Berkeley Symposium on Mathematical Statistics and Probability, vol. 1, pp. 281–297 (1967)
Mårtensson, J., Nilsson, M., Ståhlberg, F., Sundgren, P.C., Nilsson, C., van Westen, D., Larsson, E.-M., Lätt, J.: Spatial analysis of diffusion tensor tractography statistics along the inferior fronto-occipital fasciculus with application in progressive supranuclear palsy. MAGMA 26(6), 527–537 (2013)
Sorber, L., Van Barel, M., De Lathauwer, L.: Tensorlab v2.0, January 2014
Sorber, L., Van Barel, M., De Lathauwer, L.: Structured data fusion. Sel. Top. Sig. Process. 9(4), 586–600 (2015)
Stamile, C., Kocevar, G., Cotton, F., Durand-Dubief, F., Hannoun, S., Frindel, C., Rousseau, D., Sappey-Marinier, D.: Detection of longitudinal dti changes in multiple sclerosis patients based on sensitive WM fiber modeling. In: ISMRM, May-June 2015, Toronto, Canada (2015)
Stamile, C., Kocevar, G., Cotton, F., Durand-Dubief, F., Hannoun, S., Frindel, C., Rousseau, D., Sappey-Marinier, D.: A longitudinal model for variations detection in white matter fiber-bundles. In: IWSSIP, pp. 57–60 (2015)
Tournier, J.D., Calamante, F., Connelly, A.: MRtrix: diffusion tractography in crossing fiber regions. Int. J. Imaging Syst. Technol. 22, 53–66 (2012)
Varentsova, A., Zhang, S., Arfanakis, K.: Development of a high angular resolution diffusion imaging human brain template. Neuroimage 91, 177–186 (2014)
Yeatman, J.D., Dougherty, R.F., Myall, N.J., Wandell, B.A., Feldman, H.M.: Tract profiles of white matter properties: automating fiber-tract quantification. PLoS One 7(11), e49790 (2012)
Zhang, H., Yushkevich, P.A., Alexander, D.C., Gee, J.C.: Deformable registration of diffusion tensor MR images with explicit orientation optimization. Med. Image Anal. 10(5), 764–785 (2006)
Zink, R., Hunyadi, B., Van Huffel, S., De Vos, M.: Tensor-based classification of auditory mobile BCI without subject-specific calibration phase. J. Neural Eng. 13(2), 026005 (2016)
Acknowledgement
This research was supported by ERC Advanced Grant, #339804 BIOTENSORS and EU MC ITN TRANSACT 2012 #316679.
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Stamile, C., Cotton, F., Maes, F., Sappey-Marinier, D., Van Huffel, S. (2016). White Matter Fiber-Bundle Analysis Using Non-negative Tensor Factorization. In: Campilho, A., Karray, F. (eds) Image Analysis and Recognition. ICIAR 2016. Lecture Notes in Computer Science(), vol 9730. Springer, Cham. https://doi.org/10.1007/978-3-319-41501-7_73
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DOI: https://doi.org/10.1007/978-3-319-41501-7_73
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