Abstract
Systematic brain informatics (BI) research depends on a large amount of prior knowledge and scientific literatures are a kind of important knowledge source. However, the increasing number of scientific literatures has led to information overload. For researchers, it is difficult to find appropriate literatures. Developing literature retrieval technologies and systems becomes an important issue during systematic BI researches. However, most of existing literature retrieval technologies optimize query conditions only based on user interests and cannot effectively reflect domain interests. This paper proposes a domain-driven literature retrieval method which adopts the spread activation model to combine the dynamic and static domain models for ranking query results. The proposed method has been applied to the PubMed dataset. The experiment results show the efficiency of our method for retrieving literatures about brain informatics.
This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsReferences
Zhong, N., Bradshaw, J.M., Liu, J.M., Taylor, J.G.: Brain informatics. IEEE Intell. Syst. 26, 16–20 (2011)
Zhong, N., Chen, J.H.: Constructing a new-style conceptual model of brain data for systematic brain informatics. IEEE Trans. Knowl. Data Eng. 24(12), 2127–2142 (2012)
Baeza-Yates, R.A., Berthier, A.: Ribeiro-Neto. Modern Information Retrieval. ACM Press/Addison-Wesley, Boston (1999)
Zhong, N., Chen, J.: Constructing a new-style conceptual model of brain data for systematic brain informatics. IEEE Trans. Knowl. Data Eng. 24(12), 2127–2142 (2012)
Jimenez-Castellanos, A., et al.: Biomedical literature retrieval based on patient information. In: Fred, A., Filipe, J., Gamboa, H. (eds.) BIOSTEC 2011. CCIS, vol. 273, pp. 312–323. Springer, Heidelberg (2013)
Sondhi, P., Sun, J., Zhai, C.X., Sorrentino, R., Kohn, M.S.: Leveraging medical thesauri and physician feedback for improving medical literature retrieval for case queries. J. Am. Med. Inform. Assoc. 19(5), 851–8 (2012)
Park, M., Lee, K.-W., Lee, H.-S., Jiayi, P., Yu, J.: Ontology-based construction knowledge retrieval system. KSCE J. Civil Eng. 17(7), 1654–1663 (2013)
Guarino, N., Masolo, C., Vetere, G.: Ontoseek: content-based access to the web. IEEE Intell. Syst. 14(3), 70–80 (1999)
Guha, R., McCool, R., Miller, E.: Semanticsearch. In: WWW 2003, pp. 700–709 (2003)
Crouch, C.J., Crouch, D.B., Nareddy, K.: Connectionist model for information retrieval based on the vector space model. Int. J. Expert Syst. 7, 139–163 (1994)
Rijsbergen, C.J.V.: Information Retrieval, 2nd edn. Butterworths, London (1979)
Anderson, R.J.: A spreading activation theory of memory. J. Verbal Learn. Verbal Behav. 22, 261–295 (1983)
Jiang, X., Tan, A.H.: OntoSearch: A full-text search engine for the semantic web. In: National Conference on Artificial Intelligence, Innovative Applications of Artificial Intelligence Conference, pp. 1325–1330 (2006)
Sheng, K.: Design and Implementation Strategy Based on Semantic Network User Ontology Model. University of Electronic Science and Technology of China, Chengdu (2014)
Acknowledgments
The work is supported by National Key Basic Research Program of China (2014CB744605), National Natural Science Foundation of China (61272345), Research Supported by the CAS/SAFEA International Partnership Program for Creative Research Teams, the Japan Society for the Promotion of Science Grants-in-Aid for Scientific Research (25330270).
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2016 Springer International Publishing AG
About this paper
Cite this paper
Sheng, W. et al. (2016). A Domain-Driven Literature Retrieval Method for Systematic Brain Informatics. In: Ascoli, G., Hawrylycz, M., Ali, H., Khazanchi, D., Shi, Y. (eds) Brain Informatics and Health. BIH 2016. Lecture Notes in Computer Science(), vol 9919. Springer, Cham. https://doi.org/10.1007/978-3-319-47103-7_18
Download citation
DOI: https://doi.org/10.1007/978-3-319-47103-7_18
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-47102-0
Online ISBN: 978-3-319-47103-7
eBook Packages: Computer ScienceComputer Science (R0)