Skip to main content

Robust and Accurate Appearance Models Based on Joint Dictionary Learning Data from the Osteoarthritis Initiative

Data from the Osteoarthritis Initiative

  • Conference paper
  • First Online:
Patch-Based Techniques in Medical Imaging (Patch-MI 2016)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 9993))

Included in the following conference series:

Abstract

Deformable model-based approaches to 3D image segmentation have been shown to be highly successful. Such methodology requires an appearance model that drives the deformation of a geometric model to the image data. Appearance models are usually either created heuristically or through supervised learning. Heuristic methods have been shown to work effectively in many applications but are hard to transfer from one application (imaging modality/anatomical structure) to another. On the contrary, supervised learning approaches can learn patterns from a collection of annotated training data. In this work, we show that the supervised joint dictionary learning technique is capable of overcoming the traditional drawbacks of the heuristic approaches. Our evaluation based on two different applications (liver/CT and knee/MR) reveals that our approach generates appearance models, which can be used effectively and efficiently in a deformable model-based segmentation framework.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Aharon, M., et al.: K-SVD: an algorithm for designing overcomplete dictionaries for sparse representation. TSP 54, 4311–4322 (2006)

    Google Scholar 

  2. Belhumeur, P.N., et al.: Localizing parts of faces using a consensus of exemplars. In: CVPR (2011)

    Google Scholar 

  3. Cootes, T.F., et al.: Active shape models - their training and application. CVIU 61, 38–59 (1995)

    Google Scholar 

  4. Cristinacce, D., et al.: Automatic feature localisation with constrained local models. J. Pattern Recogn. 41, 3054–3067 (2008)

    Article  MATH  Google Scholar 

  5. Heimann, T., et al.: Statistical shape models for 3D medical image segmentation: a review. MIA 13, 543–563 (2009)

    Google Scholar 

  6. Kainmueller, D., et al.: Shape constrained automatic segmentation of the liver basedon a heuristic intensity model. In: MICCAI Workshop 3D Segmentation in the Clinic: A Grand Challenge (2007)

    Google Scholar 

  7. Kainmueller, D., et al.: An articulated statistical shape model for accurate hip joint segmentation. In: EMBC (2009)

    Google Scholar 

  8. Lindner, C., et al.: Robust and accurate shape model matching using random forest regression-voting. PAMI 37, 1862–1874 (2015)

    Article  Google Scholar 

  9. Mukhopadhyay, A., Oksuz, I., Bevilacqua, M., Dharmakumar, R., Tsaftaris, S.A.: Data-driven feature learning for myocardial segmentation of CP-BOLD MRI. In: van Assen, H., Bovendeerd, P., Delhaas, T. (eds.) FIMH 2015. LNCS, vol. 9126, pp. 189–197. Springer, Heidelberg (2015)

    Chapter  Google Scholar 

  10. http://www.oai.ucsf.edu/

  11. Saragih, J.M., et al.: Deformable model fitting by regularized landmark mean-shift. IJCV 91, 200–215 (2011)

    Article  MathSciNet  MATH  Google Scholar 

  12. Toews, M., et al.: Efficient and robust model-to-image alignment using 3D scale-invariant features. MIA 17, 271–282 (2013)

    Google Scholar 

  13. Tropp, J.A., et al.: Signal recovery from random measurements via orthogonal matching pursuit. Trans. Inf. Theor. 53, 4655–4666 (2007)

    Article  MathSciNet  MATH  Google Scholar 

  14. Zhang, S., et al.: Deformable segmentation via sparse representation and dictionary learning. MIA 16, 1385–1396 (2012)

    Google Scholar 

Download references

Acknowledgement

This work is supported by Forschungscampus MODAL MedLab. The OAI is a public-private partnership comprised of five contracts (N01-AR-2-2258; N01-AR-2-2259; N01-AR-2-2260; N01-AR-2-2261; N01-AR-2-2262) funded by the National Institutes of Health, a branch of the Department of Health and Human Services, and conducted by the OAI Study Investigators. Private funding partners include Merck Research Laboratories; Novartis Pharmaceuticals Corporation, GlaxoSmithKline; and Pfizer, Inc. Private sector funding for the OAI is managed by the Foundation for the National Institutes of Health. This manuscript was prepared using an OAI public use data set and does not necessarily reflect the opinions or views of the OAI investigators, the NIH, or the private funding partners.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Anirban Mukhopadhyay .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing AG

About this paper

Cite this paper

Mukhopadhyay, A., Victoria, O.S.M., Zachow, S., Lamecker, H. (2016). Robust and Accurate Appearance Models Based on Joint Dictionary Learning Data from the Osteoarthritis Initiative. In: Wu, G., Coupé, P., Zhan, Y., Munsell, B., Rueckert, D. (eds) Patch-Based Techniques in Medical Imaging. Patch-MI 2016. Lecture Notes in Computer Science(), vol 9993. Springer, Cham. https://doi.org/10.1007/978-3-319-47118-1_4

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-47118-1_4

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-47117-4

  • Online ISBN: 978-3-319-47118-1

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics