Abstract
Parkinsonism is the second most common neurodegenerative disease, originated by a dopamine decrease in the striatum. Single Photon Emission Computed Tomography (SPECT) images acquired using the DaTSCAN drug are a widely extended tool in the diagnosis of Parkinson’s Disease (PD), since they can measure the amount of dopamine transporters in the striatum. Many automatic systems have been developed to aid in the diagnosis of PD, using traditional feature extraction methods. In this paper, we propose a novel system based on three-dimensional Convolutional Neural Networks (CNNs), that aims to differenciate between PD-affected patients and unaffected subjects. The proposed system achieves up to a 95.5% accuracy and 96.2% sensitivity in the diagnosis of PD.
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Abadi, M., Agarwal, A., Barham, P., Brevdo, E., Chen, Z., Citro, C., Corrado, G.S., Davis, A., Dean, J., Devin, M., Ghemawat, S., Goodfellow, I., Harp, A., Irving, G., Isard, M., Jia, Y., Jozefowicz, R., Kaiser, L., Kudlur, M., Levenberg, J., Mané, D., Monga, R., Moore, S., Murray, D., Olah, C., Schuster, M., Shlens, J., Steiner, B., Sutskever, I., Talwar, K., Tucker, P., Vanhoucke, V., Vasudevan, V., Viégas, F., Vinyals, O., Warden, P., Wattenberg, M., Wicke, M., Yu, Y., Zheng, X.: TensorFlow: large-scale machine learning on heterogeneous systems (2015). http://tensorflow.org/, software available from tensorflow.org
Benamer, T.S., Patterson, J., Grosset, D.G., Booij, J., Bruin, K., Royen, E., Speelman, J.D., Horstink, M.H., Sips, H.J., Dierckx, R.A., Versijpt, J., Decoo, D., Linden, C., Hadley, D.M., Doder, M., Lees, A.J., Costa, D.C., Gacinovic, S., Oertel, W.H., Pogarell, O., Hoeffken, H., Joseph, K., Tatsch, K., Schwarz, J., Ries, V.: Accurate differentiation of Parkinsonism and essential tremor using visual assessment of [123I]-FP-CIT SPECT imaging: the [123I]-FP-CIT study group. Mov. Disord.: Official J. Mov. Disord. Soc. 15(3), 503–510 (2000). PMID: 10830416
Booij, J., Habraken, J.B., Bergmans, P., Tissingh, G., Winogrodzka, A., Wolters, E.C., Janssen, A.G., Stoof, J.C., Royen, E.A.: Imaging of dopamine transporters with iodine-123-FP-CIT SPECT in healthy controls and patients with Parkinson’s disease. J. Nucl. Med. 39(11), 1879–1884 (1998)
Ciresan, D.C., Meier, U., Masci, J., Maria Gambardella, L., Schmidhuber, J.: Flexible, high performance convolutional neural networks for image classification. In: IJCAI Proceedings-International Joint Conference on Artificial Intelligence, Barcelona, Spain, vol. 22, p. 1237 (2011)
Eckert, T., Edwards, C.: The application of network mapping in differential diagnosis of Parkinsonian disorders. Clin. Neurosci. Res. 6(6), 359–366 (2007). http://www.sciencedirect.com/science/article/pii/S1566277207000023. Neural Networks in the Imaging of Neuropsychiatric Diseases
Erro, R., Schneider, S.A., Stamelou, M., et al.: What do patients with scans without evidence of dopaminergic deficit (SWEDD) have? New evidence and continuing controversies. J. Neurol. Neurosurg. Psychiatry 87, 319–323 (2016)
Friston, K., Ashburner, J., Kiebel, S., Nichols, T., Penny, W.: Statistical Parametric Mapping: The Analysis of Functional Brain Images. Academic Press, Cambridge (2007)
Initiative, T.P.P.M.: PPMI: Imaging Technical Operations Manual, 2nd edn, June 2010
Kohavi, R.: A study of cross-validation and bootstrap for accuracy estimation and model selection. In: Proceedings of International Joint Conference on AI, pp. 1137–1145 (1995). http://citeseer.ist.psu.edu/kohavi95study.html
Krizhevsky, A., Sutskever, I., Hinton, G.E.: Imagenet classification with deep convolutional neural networks. In: Advances in Neural Information Processing Systems, pp. 1097–1105 (2012)
Lau, L.M.L., Breteler, M.M.B.: Epidemiology of Parkinson’s disease. Lancet Neurol. 5, 525–535 (2006)
Marshall, V.L., Reininger, C.B., Marquardt, M., Patterson, J., Hadley, D.M., Oertel, W.H., Benamer, H.T., Kemp, P., Burn, D., Tolosa, E., et al.: Parkinson’s disease is overdiagnosed clinically at baseline in diagnostically uncertain cases: a 3-year European multicenter study with repeat [123i] FP-CIT SPECT. Mov. Disord. 24(4), 500–508 (2009)
Martinez-Murcia, F., Górriz, J., Ramírez, J., Moreno-Caballero, M., Gómez-Río, M., Initiative, P.P.M., et al.: Parametrization of textural patterns in 123i-ioflupane imaging for the automatic detection of Parkinsonism. Med. Phys. 41(1), 012502 (2014)
Martínez-Murcia, F.J., Górriz, J.M., Ramírez, J., Illán, I., Ortiz, A.: Automatic detection of Parkinsonism using significance measures and component analysis in datscan imaging. Neurocomputing 126, 58–70 (2014)
Ortiz, A., Martínez-Murcia, F.J., García-Tarifa, M.J., Lozano, F., Górriz, J.M., Ramírez, J.: Automated diagnosis of Parkinsonian syndromes by deep sparse filtering-based features. In: Chen, Y.-W., Tanaka, S., Howlett, R.J., Jain, L.C. (eds.) Innovation in Medicine and Healthcare 2016. SIST, vol. 60, pp. 249–258. Springer, Cham (2016). doi:10.1007/978-3-319-39687-3_24
Payan, A., Montana, G.: Predicting Alzheimer’s disease: a neuroimaging study with 3D convolutional neural networks. arXiv preprint arXiv:1502.02506 (2015)
Salas-Gonzalez, D., Górriz, J.M., Ramírez, J., Illán, I.A., Padilla, P., Martínez-Murcia, F.J., Lang, E.W.: Building a FP-CIT SPECT brain template using a posterization approach. Neuroinformatics 13(4), 391–402 (2015)
Salas-Gonzalez, D., Górriz, J.M., Ramírez, J., López, M., Illan, I.A., Segovia, F., Puntonet, C.G., Gómez-Río, M.: Analysis of SPECT brain images for the diagnosis of Alzheimer’s disease using moments and support vector machines. Neurosci. Lett. 461, 60–64 (2009)
Schmidhuber, J.: Deep learning in neural networks: an overview. Neural Netw. 61, 85–117 (2015)
Segovia, F., Górriz, J.M., Ramírez, J., Álvarez, I., Jiménez-Hoyuela, J.M., Ortega, S.J.: Improved Parkinsonism diagnosis using a partial least squares based approach. Med. Phys. 39(7), 4395–4403 (2012)
Segovia, F., Gorriz, J., Ramírez, J., Salas-Gonzalez, D.: Multiclass classification of 18 F-DMFP-PET data to assist the diagnosis of Parkinsonism. In: 2016 International Workshop on Pattern Recognition in Neuroimaging (PRNI), pp. 1–4. IEEE (2016)
Segovia, F., García-Pérez, M., Górriz, J.M., Ramírez, J., Martínez-Murcia, F.J.: Assisting the diagnosis of neurodegenerative disorders using principal component analysis and tensorflow. In: Graña, M., López-Guede, J.M., Etxaniz, O., Herrero, Á., Quintián, H., Corchado, E. (eds.) ICEUTE/SOCO/CISIS -2016. AISC, vol. 527, pp. 43–52. Springer, Cham (2017). doi:10.1007/978-3-319-47364-2_5
Springenberg, J.T., Dosovitskiy, A., Brox, T., Riedmiller, M.: Striving for simplicity: the all convolutional net. arXiv preprint arXiv:1412.6806 (2014)
Towey, D.J., Bain, P.G., Nijran, K.S.: Automatic classification of 123I-FP-CIT (DaTSCAN) SPECT images. Nucl. Med. Commun. 32(8), 699–707 (2011). http://www.ncbi.nlm.nih.gov/pubmed/21659911. PMID: 21659911
Acknowledgements
This work was partly supported by the MINECO/FEDER under the TEC2015-64718-R project and the Consejera de Economía, Innovación, Ciencia y Empleo (Junta de Andalucía, Spain) under the Excellence Project P11-TIC- 7103.
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Martinez-Murcia, F.J. et al. (2017). A 3D Convolutional Neural Network Approach for the Diagnosis of Parkinson’s Disease. In: Ferrández Vicente, J., Álvarez-Sánchez, J., de la Paz López, F., Toledo Moreo, J., Adeli, H. (eds) Natural and Artificial Computation for Biomedicine and Neuroscience. IWINAC 2017. Lecture Notes in Computer Science(), vol 10337. Springer, Cham. https://doi.org/10.1007/978-3-319-59740-9_32
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DOI: https://doi.org/10.1007/978-3-319-59740-9_32
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