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A Method of Electronic Medical Record Similarity Computation

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Smart Health (ICSH 2016)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 10219))

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Abstract

With the development of electronic healthcare, more and more medical institutions begin to use the information system to manage their patient’s health records as well as other healthcare data. Electronic medical records (EMR) contain the patient’s personal information, medical history, clinical examination, treatment process, and other information, which have large research value. Today, enormous number of electronic medical records accumulated through the hospital information system all over the world. Analyzing these EMRs can effectively assist doctors in clinical decision-making, provide data support for clinical research as well as personalized healthcare service for patients. This paper presents a EMR similarity computation system. The system accepts EMRs collected from hospitals as input, go through a series of process, and eventually calculates the similarity of any two EMRs. An diseases classification experiment was designed to illustrate the effectiveness of the method. This system lays the foundation for further analysis of electronic medical records.

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References

  1. Demner-Fushman, D., Chapman, W.W., McDonald, C.J.: What can natural language processing do for clinical decision support? J. Biomed. Inf. 42(5), 760–772 (2009)

    Article  Google Scholar 

  2. Islam, A., Inkpen, D.: Semantic text similarity using corpus-based word similarity and string similarity. ACM Trans. Knowl. Disc. Data (TKDD) 2(2), 10 (2008)

    Google Scholar 

  3. Mathur, S., Dinakarpandian, D.: Finding disease similarity based on implicit semantic similarity. J. Biomed. Inf. 45(2), 363–371 (2012)

    Article  Google Scholar 

  4. Pedersen, T., Pakhomov, S.V., Patwardhan, S., Chute, C.G.: Measures of semantic similarity and relatedness in the biomedical domain. J. Biomed. Inf. 40(3), 288–299 (2007)

    Article  Google Scholar 

  5. Pedersen, T., Pakhomov, S., McInnes, B., Liu, Y.: Measuring the similarity and relatedness of concepts in the medical domain: Ihi 2012 tutorial overview. In: Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium, pp. 879–880. ACM (2012)

    Google Scholar 

  6. Hersh, W., Mailhot, M., Arnott-Smith, C., Lowe, H.: Selective automated indexing of findings and diagnoses in radiology reports. J. Biomed. Inf. 34(4), 262–273 (2001)

    Article  Google Scholar 

  7. Dong, H., Hussain, F.K.: Semantic service matchmaking for digital health ecosystems. Knowl. Based Syst. 24(6), 761–774 (2011)

    Article  Google Scholar 

  8. SáNchez, D., Batet, M.: Semantic similarity estimation in the biomedical domain: an ontology-based information-theoretic perspective. J. Biomed. Inf. 44(5), 749–759 (2011)

    Article  Google Scholar 

  9. García, M.M., Allones, J.L.I., Hernández, D.M., Iglesias, M.J.T.: Semantic similarity-based alignment between clinical archetypes and snomed CT: an application to observations. Int. J. Med. Inf. 81(8), 566–578 (2012)

    Article  Google Scholar 

  10. Lindberg, D.A., Humphreys, B.L., McCray, A.T.: The unified medical language system. Methods Inf. Med. 32(4), 281–291 (1993)

    Google Scholar 

  11. Zhang, H.-P., Yu, H.-K., Xiong, D.-Y., Liu, Q.: HHMM-based Chinese lexical analyzer ICTCLAS. In: Proceedings of the Second SIGHAN Workshop on Chinese Language Processing, vol. 17, pp. 184–187. Association for Computational Linguistics (2003)

    Google Scholar 

  12. Jiang, Y., Zhang, X., Tang, Y., Nie, R.: Feature-based approaches to semantic similarity assessment of concepts using wikipedia. Inf. Process. Manage. 51(3), 215–234 (2015)

    Article  Google Scholar 

  13. Ruch, P., Baud, R., Geissbuhler, A., Rassinoux, A.-M.: Comparing general and medical texts for information retrieval based on natural language processing: an inquiry into lexical disambiguation. Stud. Health Technol. Inf. 1, 261–265 (2001)

    Google Scholar 

  14. McInnes, B.T., Pedersen, T.: Evaluating measures of semantic similarity and relatedness to disambiguate terms in biomedical text. J. Biomed. Inf. 46(6), 1116–1124 (2013)

    Article  Google Scholar 

  15. Mutalik, P.G., Deshpande, A., Nadkarni, P.M.: Use of general-purpose negation detection to augment concept indexing of medical documents. J. Am. Med. Inf. Assoc. 8(6), 598–609 (2001)

    Article  Google Scholar 

  16. Chapman, W.W., Bridewell, W., Hanbury, P., Cooper, G.F., Buchanan, B.G.: A simple algorithm for identifying negated findings and diseases in discharge summaries. J. Biomed. Inf. 34(5), 301–310 (2001)

    Article  Google Scholar 

  17. Huang, Y., Lowe, H.J.: A novel hybrid approach to automated negation detection in clinical radiology reports. J. Am. Med. Inf. Assoc. 14(3), 304–311 (2007)

    Article  Google Scholar 

  18. Gøeg, K.R., Cornet, R., Andersen, S.K.: Clustering clinical models from local electronic health records based on semantic similarity. J. Biomed. Inf. 54, 294–304 (2015)

    Article  Google Scholar 

  19. Dumais, S.T.: Latent semantic analysis. Ann. Rev. Inf. Sci. Technol. 38(1), 188–230 (2004)

    Article  Google Scholar 

  20. Hofmann, T.: Probabilistic latent semantic indexing. In: Proceedings of the 22nd Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, pp. 50–57. ACM (1999)

    Google Scholar 

  21. Blei, D.M., Ng, A.Y., Jordan, M.I.: Latent dirichlet allocation. J. Mach. Learn. Res. 3, 993–1022 (2003)

    MATH  Google Scholar 

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Acknowledgment

This work is supported by China National Key Technology Research and Development Program project with no. 2013BAH05F02.

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Correspondence to Jijiang Yang .

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He, Z., Yang, J., Wang, Q., Li, J. (2017). A Method of Electronic Medical Record Similarity Computation. In: Xing, C., Zhang, Y., Liang, Y. (eds) Smart Health. ICSH 2016. Lecture Notes in Computer Science(), vol 10219. Springer, Cham. https://doi.org/10.1007/978-3-319-59858-1_18

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  • DOI: https://doi.org/10.1007/978-3-319-59858-1_18

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-59857-4

  • Online ISBN: 978-3-319-59858-1

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