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Radial Basis Function Interpolation for Rapid Interactive Segmentation of 3-D Medical Images

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Part of the book series: Communications in Computer and Information Science ((CCIS,volume 723))

Abstract

Segmentation is one of the most important parts of medical image processing. Manual segmentation is very cumbersome and time-consuming. Fully automatic segmentation approaches require a large amount of labeled training data and may fail in difficult cases. In this paper, we propose a new method for 2-D segmentation and 3-D interpolation. The Smart Brush functionality quickly segments the ROI in a few 2-D slices. Given these annotated slices, our adapted formulation of Hermite Radial Basis Functions reconstructs the 3-D surface. Effective interactions with less number of equations accelerate the performance and therefore, a real-time and an intuitive, interactive segmentation can be supported effectively. The proposed method was evaluated on 12 clinical 3-D MRI data sets from individual patients and were compared to gold standard annotations of the left ventricle from a clinical expert. The 2-D Smart Brush resulted in an average Dice coefficient of \(0.88\pm 0.09\) for individual slices. For the 3-D interpolation using Hermite Radial Basis Functions an average Dice coefficient of \(0.94\pm 0.02\) was achieved.

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Correspondence to Negar Mirshahzadeh .

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Mirshahzadeh, N. et al. (2017). Radial Basis Function Interpolation for Rapid Interactive Segmentation of 3-D Medical Images. In: Valdés Hernández, M., González-Castro, V. (eds) Medical Image Understanding and Analysis. MIUA 2017. Communications in Computer and Information Science, vol 723. Springer, Cham. https://doi.org/10.1007/978-3-319-60964-5_57

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  • DOI: https://doi.org/10.1007/978-3-319-60964-5_57

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-60963-8

  • Online ISBN: 978-3-319-60964-5

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