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Learning Misclassification Costs for Imbalanced Datasets, Application in Gene Expression Data Classification

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Abstract

Cost-sensitive algorithms have been widely used to solve imbalanced classification problem. However, the misclassification costs are usually determined empirically, leading to uncertain performance. Hence an effective method is desired to automatically calculate the optimal cost weights. Targeting at the highest weighted classification accuracy (WCA), we propose two approaches to search for the optimal cost weights, including grid searching and function fitting. In experiments, we classify imbalanced gene expression data using extreme learning machine to test the cost weights obtained by the two approaches. Comprehensive experimental results show that the function fitting is more efficient which can well find the optimal cost weights with acceptable WCA.

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Acknowledgments

This study is supported by National Natural Science Foundation of China (Nos. 61272315, 61402417, 61602431 and 61701468), Zhejiang Provincial Natural Science Foundation (Nos. Y1110342, LY15F020037) and International Cooperation Project of Zhejiang Provincial Science and Technology Department (No. 2017C34003).

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Correspondence to Minchao Ye .

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Lu, H., Xu, Y., Ye, M., Yan, K., Jin, Q., Gao, Z. (2018). Learning Misclassification Costs for Imbalanced Datasets, Application in Gene Expression Data Classification. In: Huang, DS., Bevilacqua, V., Premaratne, P., Gupta, P. (eds) Intelligent Computing Theories and Application. ICIC 2018. Lecture Notes in Computer Science(), vol 10954. Springer, Cham. https://doi.org/10.1007/978-3-319-95930-6_47

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  • DOI: https://doi.org/10.1007/978-3-319-95930-6_47

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  • Publisher Name: Springer, Cham

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  • Online ISBN: 978-3-319-95930-6

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