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Computational Geometry-Based Scale-Space and Modal Image Decomposition

Application to Light Video-Microscopy Imaging

  • Conference paper
Scale Space and Variational Methods in Computer Vision (SSVM 2009)

Abstract

In this paper a framework for defining scale-spaces, based on the computational geometry concepts of α-shapes, is proposed. In this approach, objects (curves or surfaces) of increasing convexity are computed by selective sub-sampling, from the original shape to its convex hull. The relationships with the Empirical Mode Decomposition (EMD), the curvature motion-based scale-space and some operators from mathematical morphology, are studied. Finally, we address the problem of additive image/signal decomposition in fluorescence video-microscopy. An image sequence is mainly considered as a collection of 1D temporal signals, each pixel being associated with its temporal intensity variation.

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References

  1. Amidror, I.: Scattered data interpolation methods for electronic imaging systems: a survey. Journal of Electronic Imaging 11, 157–176 (2002)

    Article  Google Scholar 

  2. CGAL Editorial Board. CGAL-3.2 User and Reference Manual (2006)

    Google Scholar 

  3. Bobach, T., Hering-Bertram, M., Umlauf, G.: Comparison of voronoi based scattered data interpolation schemes. Palma de Majorque (2006)

    Google Scholar 

  4. Boulanger, J., Kervrann, C., Bouthemy, P.: Estimation of dynamic background for fluorescence video-microscopy. In: 2006 IEEE International Conference on Image Processing, pp. 2509–2512 (2006)

    Google Scholar 

  5. Cao, F.: Geometric curve evolution and image processing. Lecture notes in mathematics (2003)

    Google Scholar 

  6. Caselles, V., Morel, J.M., Sbert, C.: An axiomatic approach to image interpolation. IEEE Trans. Image Processing 7, 376–386 (1998)

    Article  MathSciNet  MATH  Google Scholar 

  7. de Berg, M., van Kreveld, M., Overmars, M., Schwarzkopf, O.: Computational geometry: algorithms and applications. Springer, New York (1997)

    Book  MATH  Google Scholar 

  8. Edelsbrunner, H., Mucke, E.P.: Three-dimensional alpha shapes. ACM Transactions on Graphics 13, 43–72 (1994)

    Article  MATH  Google Scholar 

  9. Flandrin, P., Rilling, G., Goncalves, P.: Empirical mode decomposition as a filter bank. IEEE Signal Processing Letters 11, 112–114 (2004)

    Article  Google Scholar 

  10. Huang, N.E., Shen, Z., Long, S.R., Wu, M.C., Shih, H.H., Zheng, Q., Yen, N.-C., Tung, C.C., Liu, H.H.: The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis. Royal Society of London Proceedings Series A 454, 903 (1998)

    Article  MathSciNet  MATH  Google Scholar 

  11. Nunes, J.C., Bouaoune, Y., Delechelle, E., Niang, O., Bunel, P.: Image analysis by bi-dimensional empirical mode decomposition. Image and Vision Computing 21, 1019–1026 (2003)

    Article  MATH  Google Scholar 

  12. Panfili, J., de Pontual, H., Troadec, H., Wright, P.J. (eds.): Manual of fish sclerochronology, Ifremer-ird coedition (2002)

    Google Scholar 

  13. Pecot, T., Kervrann, C., Bouthemy, P.: Minimal paths and probabilistic models for origin-destination traffic estimation in live cell imaging. In: ISBI 2008, pp. 843–846 (2008)

    Google Scholar 

  14. Racine, V., Sachse, M., Salamero, J., Frasier, V., Trubuil, A., Sibarita, J.-B.: Visualization and quantification of vesicle trafficking on a three-dimensional cytoskeleton network in living cells. Journal of Microscopy 225, 214–228 (2007)

    Article  MathSciNet  Google Scholar 

  15. Serra, J.: Image analysis and mathematical morphology, vol. 1. Academic press, London (1982)

    MATH  Google Scholar 

  16. Vese, L.: A method to convexify functions via curve evolution. Commun. Partial Differential Equations 24, 1573 (1999)

    Article  MathSciNet  MATH  Google Scholar 

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© 2009 Springer-Verlag Berlin Heidelberg

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Chessel, A., Cinquin, B., Bardin, S., Salamero, J., Kervrann, C. (2009). Computational Geometry-Based Scale-Space and Modal Image Decomposition. In: Tai, XC., Mørken, K., Lysaker, M., Lie, KA. (eds) Scale Space and Variational Methods in Computer Vision. SSVM 2009. Lecture Notes in Computer Science, vol 5567. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02256-2_64

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  • DOI: https://doi.org/10.1007/978-3-642-02256-2_64

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-02255-5

  • Online ISBN: 978-3-642-02256-2

  • eBook Packages: Computer ScienceComputer Science (R0)

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