Abstract
Protein secondary structure prediction is the method of extracting locally defined protein structures from the sequence of amino acids. It is a challenging and elucidating part of the field of bioinformatics. Several methods are attempting to meet these challenges. But the Artificial Neural Network (ANN) technique is turning out to be the most successful. In this work, an ANN based multi level classifier is designed for predicting secondary structure of the proteins. In this method ANNs are trained to make them capable of recognizing amino acids in a sequence following which from these amino acids secondary structures are derived. Then based on the majority of the secondary structure final structure is derived. This work shows the prediction of secondary structure of proteins employing ANNs though it is restricted initially to four structures only.
This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsPreview
Unable to display preview. Download preview PDF.
References
Xiu-fen, Z., Zi-shu, P., Lishan, K., Chu-yu, Z.: The Evolutionary computation Techniques for Protein Structure Prediction A Survey. WU411 Wuhan University Journal of Natural Sciences 8(1B), Article ID: 1007-1202(2003)01Pr0297-06 (2003)
Akkaladevi, S., Katangur, A.K., Belkasim, S., Pan, Y.: GA 30303 Protein Secondary Structure Prediction using Neural Network and Simulated Annealing Algorithm. In: Proceedings of the 26th Annual International Conference of the IEEE EMBS, San Francisco, CA, USA, September 1-5 (2004)
Ghoting, A.: Protein Secondary Structure Prediction using Neural Networks
Haykin, S.: Neural Networks A Comprehensive Foundation, 2nd edn. Pearson Education, New Delhi (2003)
Kim, H., Park, H.: Protein secondary structure prediction based on an improved support vector machine approach. Protein Eng. 16(8), 553–560 (2003)
Afzal, A.: Applications of neural networks in protein structure prediction
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2012 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Bordoloi, H., Sarma, K.K. (2012). Protein Structure Prediction Using Multiple Artificial Neural Network Classifier. In: Patnaik, S., Yang, YM. (eds) Soft Computing Techniques in Vision Science. Studies in Computational Intelligence, vol 395. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-25507-6_12
Download citation
DOI: https://doi.org/10.1007/978-3-642-25507-6_12
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-25506-9
Online ISBN: 978-3-642-25507-6
eBook Packages: EngineeringEngineering (R0)