Skip to main content

Semi-Supervised Sparse Label Fusion for Multi-atlas Based Segmentation

  • Conference paper
Book cover Pattern Recognition (CCPR 2012)

Part of the book series: Communications in Computer and Information Science ((CCIS,volume 321))

Included in the following conference series:

  • 3384 Accesses

Abstract

Multi-atlas based label fusion has shown great success in automatic and accurate medical image segmentation. However, most existing methods often equally and independently treat each voxel in labeling, and thus 1) find difficulty in discerning real and useful neighbors from those confusing ones in atlas images and 2) cannot use the structure information in images to be segmented. Motivated by these problems, in this paper, we propose a novel semi-supervised sparse method (SSSM) for multi-atlas label fusion. In the SSSM method, we first construct a unified graph with both labeled and unlabeled voxels and then use sparse representation to automatically determine the corresponding graph weights, which is followed by semi-supervised classification on the graph. Experimental results on segmenting brain anatomical structures in MR images show that our proposed method achieves not only improved accuracy but also more smooth segmented images, compared with conventional label fusion methods.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Artaechevarria, X., Munoz-Barrutia, A., Solorzano, C.O.: Combination strategies in multi-atlas image segmentation: Application to brain MR data. IEEE Trans. Med. Imag. 28, 1266–1277 (2009)

    Article  Google Scholar 

  2. Coupe, P., Manjon, J.V., Fonov, V., Pruessner, J.: Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation. Neuroimage 54, 940–954 (2011)

    Article  Google Scholar 

  3. Rousseau, F., Habas, P.A., Studholme, C.: A Supervised Patch-Based Approach for Human Brain Labeling. IEEE Trans. Med. Imag. 30, 1852–1862 (2011)

    Article  Google Scholar 

  4. Warfield, S.K., Zou, K.H., Wells, W.M.: Simultaneous truth and performance level estimation (STAPLE): An algorithm for the validation of image segmentation. IEEE Trans. Med. Imag. 23, 903–921 (2004)

    Article  Google Scholar 

  5. Coupé, P., Manjón, J.V., Fonov, V., Pruessner, J., Robles, M., Collins, D.L.: Nonlocal Patch-Based Label Fusion for Hippocampus Segmentation. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010, Part III. LNCS, vol. 6363, pp. 129–136. Springer, Heidelberg (2010)

    Chapter  Google Scholar 

  6. Wang, H., Suh, J.W., Das, S.: Regression-Based Label Fusion for Multi-Atlas Segmentation. In: 23th IEEE Conference on Computer Vision and Pattern Regonition, pp. 1113–1120. IEEE Press, New York (2011)

    Google Scholar 

  7. Wright, J., Ganesh, A., Ma, Y.: Robust Face Recognition via Sparse Representation. IEEE Trans. Pattern Anal. Mach. Intell. 31, 210–227 (2009)

    Article  Google Scholar 

  8. SLEP: Sparse learning with efficient projections, http://www.public.asu.edu/~jye02

  9. Yan, S., Wang, H.: Semi-supervised Learning by Sparse Representation. In: The SIAM Data Mining Conference, pp. 792–801. CSREA Press, Philadelphia (2009)

    Google Scholar 

  10. Christensen, G.E., Geng, X., Kuhl, J.G., Bruss, J., Grabowski, T.J., Pirwani, I.A., Vannier, M.W., Allen, J.S., Damasio, H.: Introduction to the Non-rigid Image Registration Evaluation Project (NIREP). In: Pluim, J.P.W., Likar, B., Gerritsen, F.A. (eds.) WBIR 2006. LNCS, vol. 4057, pp. 128–135. Springer, Heidelberg (2006)

    Chapter  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Guo, Q., Zhang, D. (2012). Semi-Supervised Sparse Label Fusion for Multi-atlas Based Segmentation. In: Liu, CL., Zhang, C., Wang, L. (eds) Pattern Recognition. CCPR 2012. Communications in Computer and Information Science, vol 321. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-33506-8_58

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-33506-8_58

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-33505-1

  • Online ISBN: 978-3-642-33506-8

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics