Skip to main content

Comparison of CNN Visualization Methods to Aid Model Interpretability for Detecting Alzheimer’s Disease

  • Conference paper
  • First Online:

Part of the book series: Informatik aktuell ((INFORMAT))

Zusammenfassung

Advances in medical imaging and convolutional neural networks (CNNs) have made it possible to achieve excellent diagnostic accuracy from CNNs comparable to human raters. However, CNNs are still not implemented in medical trials as they appear as a black box system and their inner workings cannot be properly explained. Therefore, it is essential to assess CNN relevance maps, which highlight regions that primarily contribute to the prediction. This study focuses on the comparison of algorithms for generating heatmaps to visually explain the learned patterns of Alzheimer’s disease (AD) classification. T1-weighted volumetric MRI data were entered into a 3D CNN. Heatmaps were then generated for different visualization methods using the iNNvestigate and keras-vis libraries. The model reached an area under the curve of 0.93 and 0.75 for separating AD dementia patients from controls and patients with amnestic mild cognitive impairment from controls, respectively. Visualizations for the methods deep Taylor decomposition and layer-wise relevance propagation (LRP) showed most reasonable results for individual patients matching expected brain regions. Other methods, such as Grad-CAM and guided backpropagation showed more scattered activations or random areas. For clinically research, deep Taylor decomposition and LRP showed most valuable network activation patterns.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   54.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   69.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

Literatur

  1. Alber M, Lapuschkin S, Seegerer P, et al. iNNvestigate neural networks! J Mach Learn Res. 2019;20:1–8.

    Google Scholar 

  2. Rieke J, Eitel F, Weygandt M, et al. Visualizing vonvolutional networks for MRIbased diagnosis of Alzheimer’s disease. In: Understanding and Interpreting Machine Learning in Medical Image Computing Applications. Springer; 2018. p. 24–31.

    Google Scholar 

  3. Böhle M, Eitel F, Weygandt M, et al. Layer-wise relevance propagation for explaining deep neural network decisions in MRI-based Alzheimer’s disease classification. Front Aging Neurosci. 2019;11:194.

    Google Scholar 

  4. Zintgraf LM, Cohen TS, Adel T, et al. Visualizing deep neural network decisions: prediction difference analysis. In: International Conference on Learning Representations (ICLR); 2017. .

    Google Scholar 

  5. Grothe M, Heinsen H, Teipel S. Longitudinal measures of cholinergic forebrain atrophy in the transition from healthy aging to Alzheimer’s disease. Neurobiol Aging. 2013;34(4):1210–1220.

    Google Scholar 

  6. Dyrba M, Barkhof F, Fellgiebel A, et al. Predicting prodromal Alzheimer’s disease in subjects with mild cognitive impairment using machine learning classification of multimodal multicenter DTI and MRI data. J Neuroimaging. 2015;25(5):738–747.

    Google Scholar 

  7. Kotikalapudi R, contributors. keras-vis. GitHub; 2019.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Martin Dyrba .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2020 Springer Fachmedien Wiesbaden GmbH, ein Teil von Springer Nature

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Dyrba, M., Pallath, A.H., Marzban, E.N. (2020). Comparison of CNN Visualization Methods to Aid Model Interpretability for Detecting Alzheimer’s Disease. In: Tolxdorff, T., Deserno, T., Handels, H., Maier, A., Maier-Hein, K., Palm, C. (eds) Bildverarbeitung für die Medizin 2020. Informatik aktuell. Springer Vieweg, Wiesbaden. https://doi.org/10.1007/978-3-658-29267-6_68

Download citation

Publish with us

Policies and ethics