Skip to main content

Data-Driven Spine Detection for Multi-Sequence MRI

  • Conference paper
  • First Online:
Book cover Bildverarbeitung für die Medizin 2015

Part of the book series: Informatik aktuell ((INFORMAT))

  • 2559 Accesses

Abstract

Epidemiology studies on vertebra’s shape and appearance require big databases of medical images and image processing methods, that are robust against deformation and noise. This work presents a solution of the first step: the vertebrae detection. We propose a method that automatically detects the central spinal curve with 3D data-driven methods in multi-sequence magnetic resonance images (MRl). Additionally, we use simple edge operations for vertebra border detection that can be used for a statistical evaluation with help of some fast user interaction. Our automatic vertebrae detection algorithm fits a polynomial curve through the spinal canal, that afterwards is shifted towards the vertebra centers. An edge operator gives a first approximation of the vertebra borders, that can be evaluated and corrected by some user interaction within 12 seconds. We show, that our algorithm automatically detects more than 90% of all spines correctly, and present a preliminary analysis of vertebrae sizes.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 79.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 84.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. V¨olzke H, Alte D, Schmidt CO, et al. Cohort profile: the study of health in Pomerania. Int J Epidemiol. 2011;40(2):294–307.

    Article  Google Scholar 

  2. T¨onnies KD, Rak M, Engel K. Deformable part models for object detection in medical images. Biomed Eng Online. 2014;13:S1.

    Article  Google Scholar 

  3. Kadoury S, Labelle H, Paragios N. Spine segmentation in medical images using manifold embeddings and higher-order MRFs. IEEE Trans Med Imaging. 2013;32(7):1227–38.

    Article  Google Scholar 

  4. Neubert A, Fripp J, Engstrom C, et al. Automated detection, 3D segmentation and analysis of high resolution spine MR images using statistical shape models. Phys Med Biol. 2012;57(24):8357–76.

    Article  Google Scholar 

  5. Dong X, Lu H, Sakurai Y, et al. Automated intervertebral disc detection from low resolution, sparse MRI images for the planning of scan geometries. Lect Notes Computer Sci. 2010;6357:10–7.

    Article  Google Scholar 

  6. Pohle-Fr¨ohlich R, Brandt C, Koy T. Segmentierung der lumbalen bandscheiben in MRT-bilddaten. Proc BVM. 2013; p. 63–8.

    Google Scholar 

  7. Huang SH, Chu YH, Lai SH, et al. Learning-based vertebra detection and iterative normalized-cut segmentation for spinal MRI. IEEE Trans Med Imaging. 2009;28(10):1595–605.

    Article  Google Scholar 

  8. Schmidt S, Kappes J, Bergtholdt M, et al. Spine detection and labeling using a parts-based graphical model. Inf Process Med Imaging. 2007;20:122–33.

    Article  Google Scholar 

  9. Stern D, Likar B, Pernus F, et al. Automated detection of spinal centrelines, vertebral bodies and intervertebral discs in CT and MR images of lumbar spine. Phys Med Biol. 2010;55(1):247–64.

    Article  Google Scholar 

  10. Vrtovec T, Ourselin S, Gomes L, et al. Automated generation of curved planar reformations from MR images of the spine. Phys Med Biol. 2007;52(10):2865–78.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Kottke, D., Gulamhussene, G., Tönnies, K. (2015). Data-Driven Spine Detection for Multi-Sequence MRI. In: Handels, H., Deserno, T., Meinzer, HP., Tolxdorff, T. (eds) Bildverarbeitung für die Medizin 2015. Informatik aktuell. Springer Vieweg, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-46224-9_3

Download citation

  • DOI: https://doi.org/10.1007/978-3-662-46224-9_3

  • Published:

  • Publisher Name: Springer Vieweg, Berlin, Heidelberg

  • Print ISBN: 978-3-662-46223-2

  • Online ISBN: 978-3-662-46224-9

  • eBook Packages: Computer Science and Engineering (German Language)

Publish with us

Policies and ethics