Skip to main content

Inflammatory Cells Detection in H&E Staining Histology Images Using Deep Convolutional Neural Network with Distance Transformation

  • Conference paper
  • First Online:
New Trends in Computer Technologies and Applications (ICS 2018)

Part of the book series: Communications in Computer and Information Science ((CCIS,volume 1013))

Included in the following conference series:

Abstract

Inflammatory cells such as lymphocytes and neutrophils are crucial indicators in diagnosing acute inflammation from liver histology images. However, there are several challenges in detecting the inflammatory cells. The inflammatory cells have large variation and also appear similar to other cells. In an often occasion, the inflammatory cells may overlap each other. It is also unavoidable to see the clustery noise in the background. To conquer the above-mentioned problems, this paper proposes a procedure, which implements the detection-then-classification by combining the distance transformation with deep convolutional neural networks for detecting an accurate position of each cell. Then a precise image patch can be extracted for a deep convolutional neural network for classification of the cells into nuclei, lymphocyte, neutrophils and impurity (e.g. Kupffer cell). The experimental results show that the proposed approach can effectively detect the inflammatory cells from H&E Staining liver histopathological images, with an accuracy of 93.7% in inflammatory cells classification.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Huang, P.W., Lai, Y.H.: Effective segmentation and classification for HCC biopsy images. Pattern Recogn. 43(4), 1550–1563 (2010)

    Article  Google Scholar 

  2. Cheng, J., Rajapakse, J.C.: Segmentation of clustered nuclei with shape markers and marking function. IEEE Trans. Biomed. Eng. 56(3), 741–748 (2009)

    Article  Google Scholar 

  3. Wang, S., Yao, J., Xu, Z., Huang, J.: Subtype cell detection with an accelerated deep convolution neural network. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9901, pp. 640–648. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-46723-8_74

    Chapter  Google Scholar 

  4. Pan, H., Xu, Z., Huang, J.: An effective approach for robust lung cancer cell detection. In: Wu, G., Coupé, P., Zhan, Y., Munsell, B., Rueckert, D. (eds.) Patch-MI 2015. LNCS, vol. 9467, pp. 87–94. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-28194-0_11

    Chapter  Google Scholar 

  5. Cireşan, D.C., Giusti, A., Gambardella, L.M., Schmidhuber, J.: Mitosis detection in breast cancer histology images with deep neural networks. In: Mori, K., Sakuma, I., Sato, Y., Barillot, C., Navab, N. (eds.) MICCAI 2013. LNCS, vol. 8150, pp. 411–418. Springer, Heidelberg (2013). https://doi.org/10.1007/978-3-642-40763-5_51

    Chapter  Google Scholar 

  6. Wang, J., MacKenzie, J.D., Ramachandran, R., Chen, D.Z.: Identifying neutrophils in H&E staining histology tissue images. In: Golland, P., Hata, N., Barillot, C., Hornegger, J., Howe, R. (eds.) MICCAI 2014. LNCS, vol. 8673, pp. 73–80. Springer, Cham (2014). https://doi.org/10.1007/978-3-319-10404-1_10

    Chapter  Google Scholar 

  7. Fatakdawala, H., et al.: Expectation–Maximization-driven Geodesic Active Contour with Overlap Resolution (EMaGACOR): application to lymphocyte segmentation on breast cancer histopathology. IEEE Trans. Biomed. Eng. 57(7), 1676–1689 (2010)

    Article  Google Scholar 

  8. Al-Kofahi, Y., Lassoued, W., Lee, W., Roysam, B.: Improved automatic detection and segmentation of cell nuclei in histopathology images. IEEE Trans. Biomed. Eng. 57(4), 841–852 (2010)

    Article  Google Scholar 

  9. Hiremath, P., Bannigidad, P., Geeta, S.: Automated identification and classification of white blood cells (leukocytes) in digital microscopic images. IJCA, Special Issue on RTIPPR 2, 59–63 (2010)

    Google Scholar 

  10. Huang, D.C., Hung, K.D., Chan, Y.K.: A computer assisted method for leukocyte nucleus segmentation and recognition in blood smear images. J. Syst. Softw. 85, 2104–2118 (2012)

    Article  Google Scholar 

  11. Vincent, L.: Morphological grayscale reconstruction in image analysis: applications and efficient algorithms. IEEE Trans. Image Process. 2, 176–201 (1993)

    Article  Google Scholar 

  12. Garcia, E., Hermoza, R., Castanon, C.B., Cano, L., Castillo, M., Castanneda, C.: Automatic lymphocyte detection on gastric cancer IHC images using deep learning. In: IEEE 30th International Symposium on Computer-Based Medical Systems (CBMS), pp. 200–204 (2017)

    Google Scholar 

Download references

Acknowledgments

This work was supported by Ministry of Science and Technology (MOST), Taiwan, under grant number MOST 107-2634-F-006-004.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Chao-Ting Li .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Singapore Pte Ltd.

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Li, CT., Chung, PC., Tsai, HW., Chow, NH., Cheng, KS. (2019). Inflammatory Cells Detection in H&E Staining Histology Images Using Deep Convolutional Neural Network with Distance Transformation. In: Chang, CY., Lin, CC., Lin, HH. (eds) New Trends in Computer Technologies and Applications. ICS 2018. Communications in Computer and Information Science, vol 1013. Springer, Singapore. https://doi.org/10.1007/978-981-13-9190-3_73

Download citation

  • DOI: https://doi.org/10.1007/978-981-13-9190-3_73

  • Published:

  • Publisher Name: Springer, Singapore

  • Print ISBN: 978-981-13-9189-7

  • Online ISBN: 978-981-13-9190-3

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics