Skip to main content
Log in

Charge calculations in molecular mechanics. IX. A general parameterisation of the scheme for saturated halogen, oxygen and nitrogen compounds

  • Research Papers
  • Published:
Journal of Computer-Aided Molecular Design Aims and scope Submit manuscript

Summary

The CHARGE2 program for the calculation of partial atomic charges has been amended to include bond parameters for a number of organic functional groups, including halogens, nitrogen and oxygen. These minor amendments to the original scheme produce dipole moments for the fluoro and chloro compounds which are in complete agreement with the observed values.

The less complete data sets for the bromo and iodo compounds are also well reproduced, and the dipole moments of a variety of mixed halo compounds are now in better agreement with experiment than previously.

The calculated dipole moments of the saturated nitrogen and oxygen compounds are now in much better agreement than in the original scheme, thus the revised parameterisation may be employed with confidence to predict the electrostatic energies of these compounds.

Furthermore, the revised scheme now gives a precise proportionality between the charge on the proton in a CH group and the 1H chemical shift of the corresponding proton, allowing the general prediction, in principle, of 1H chemical shifts. In addition, attempts to include variable electronegativity in the α effect are described for fluoro compounds.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  1. Abraham, R.J., Grant, G.H., Haworth, I.S., and Smith, P.E., J. Comput.-Aided Mol. Design, 5 (1991) 21.

    Google Scholar 

  2. Abraham, R.J., Griffiths, L. and Loftus, P., J. Comp. Chem, 3 (1982) 407.

    Google Scholar 

  3. Abraham, R.J. and Hudson, B.D., J. Comp. Chem., 5, (1984) 562.

    Google Scholar 

  4. Abraham, R.J. and Hudson, B.D., J. Comp. Chem., 6, (1985) 173.

    Google Scholar 

  5. Abraham, R.J. and Smith, P.E., J. Comp. Chem., 9, (1988) 288.

    Google Scholar 

  6. Abraham, R.J. and Grant, G.H., J. Comp. Chem., 9 (1988) 244.

    Google Scholar 

  7. Abraham, R.J. and Smith, P.E., Nucleic Acids Res., 16 (1988) 2639.

    Google Scholar 

  8. Abraham, R.J. and Smith, P.E., J. Comput.-Aided Mol. Design, 3 (1989) 175.

    Google Scholar 

  9. cf. PIMMS, COBRA, CONSTRICTOR, NEMESIS, Oxford Molecular Ltd., Oxford.

  10. Gasteiger, J. and Marsili, M., Tetrahedron, 36 (1980) 3219.

    Google Scholar 

  11. Hammerstrom, L.G., Liljefors, T. and Gasteiger, J. J. Comp. Chem., 9 (1988) 424.

    Google Scholar 

  12. Sanderson, R.T., The Chemical Bond and Bond Energy, Academic Press, New York, 1971.

    Google Scholar 

  13. Hinze, J. and Jaffe, H.H., J. Am. Chem. Soc., 84 (1962) 540.

    Google Scholar 

  14. Allred, A.L. and Rochow, E.G., J. Inorg. Nucl. Chem., 5 (1958) 264.

    Google Scholar 

  15. Iczkowski, R.P. and Margrave, J.L., J. Am. Chem. Soc., 83 (1961) 3547.

    Google Scholar 

  16. Huheey, J.E., J. Inorg. Nucl. Chem., 27 (1965), 2127.

    Google Scholar 

  17. Pople, J.A. and Gordon, M., J. Am. Chem. Soc., 89 (1967) 4253.

    Google Scholar 

  18. Miller, K.J., J. Am. Chem. Soc., 112 (1990) 8533.

    Google Scholar 

  19. McClellan, A.L., Tables of Experimental Dipole Moments, Freeman, London, 1963, Vol. 1; Rahara Enterprises, California, 1974, Vol. 2; 1989, Vol. 3.

    Google Scholar 

  20. Hellwege, K.H. (Ed.), Structure Data of Free Atomic Molecules, Landolt Bornstein, Springer, Berlin, 1976.

    Google Scholar 

  21. Parkin, J.E., Buckley, P.J. and Costain, C.C., J. Mol. Spectroscy 89 (1981) 465.

    Google Scholar 

  22. Harmony, H.D. and Sandro, M., J. Chem. Phys., 47 (1967) 1911.

    Google Scholar 

  23. Dass, S.C. and Kewley, R., Can. J. Chem., 52 (1974) 434.

    Google Scholar 

  24. Sloan, J.J. and Kewley, R., Can. J. Chem., 50 (1972) 955.

    Google Scholar 

  25. Penn, R.E. and Cure, R.F., J. Chem. Phys., 55 (1972) 651.

    Google Scholar 

  26. Rao, V.M. and Kewley, R., Can. J. Chem., 47 (1969) 1287.

    Google Scholar 

  27. Takano, M., Sasada, Y and Satok, T., J. Mol. Spectroscy. 26 (1968) 157.

    Google Scholar 

  28. Buckley, P. and Brochu, M., Can. J. Chem., 50 (1972) 1149.

    Google Scholar 

  29. Sage, M.L., J. Chem. Phys., 35 (1961) 133.

    Google Scholar 

  30. Cresswell, R.A., J. Mol. Spectroscy., 56 (1975) 133.

    Google Scholar 

  31. Slafer, W.D. and Harris, D.O., J. Mol. Spectroscy., 45 (1973) 412.

    Google Scholar 

  32. Kirby, A.J., The Anomeric Effect and Related Stereoelectronic Effects at Oxygen, Springer, Berlin, 1983.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

For part VIII see Ref. 1.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Abraham, R.J., Grant, G.H. Charge calculations in molecular mechanics. IX. A general parameterisation of the scheme for saturated halogen, oxygen and nitrogen compounds. J Computer-Aided Mol Des 6, 273–286 (1992). https://doi.org/10.1007/BF00123381

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00123381

Key words

Navigation