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User-centered Design Practice for Grid-enabled Simulation in e-Science

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Abstract

e-Science promotes global research collaboration based on Grid, hence building a user infrastructure that can facilitate the use of physical Grids to improve the Grid usability and accessibility becomes critical. This paper proposes to use a user-centered design approach to build a user level infrastructure for running Grid-enabled simulations, and reviews associated technologies. In a case study, a user infrastructure formulated by encompassing the user-centered design approach for running quantum mechanical simulation of material properties in a Grid environment is discussed.

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References

  1. CamGrid, http://www.escience.cam.ac.uk/projects/camgrid/

  2. OxGrid, http://www.oerc.ox.ac.uk/facilities/oxgrid.xml

  3. EGEE, http://public.eu-egee.org/

  4. NGS Grid, http://www.grid-support.ac.uk/

  5. Globus, http://www.globus.org/

  6. Vredenburg, K., Mao, J., Smith, P.W. and Carey, T., “A Survey of User-centered Design Practice,” in Proc. of the SIGCHI Conference on Human Factors in Computing Systems: Changing Our World, Changing Ourselves, Minneapolis, Minnesota, USA, 2002.

  7. Norman, D.A. and Draper, S.W., User-Centered System Design: New Perspectives on Human-Computer Interaction, Erlbaum, Hillsdale, NJ, 1986.

  8. Vredenburg, K., Isensee, S., and Righi, C., User-Centered Design: An Integrated Approach, Prentice Hall, 2001.

  9. Dove, M., Leeuw, de N., “Grid Computing and Molecular Simulations: the Vision of the eMinerals Project,” Molecular Simulations 31, pp. 297-301, 2005.

    Article  Google Scholar 

  10. GridSphere, http://www.Gridsphere.org

  11. Yang, X., Dove, M., Hayes, M., Calleja, M., He, L. and Murray-Rust, P., “Survey of Tools and Technologies for Grid-enabled Portals,” UK e-Science All Hands on Conference, 2006, pp. 353-356, UK.

  12. Russell, M., Allen, G., Daues, G., Foster, I., Seidel, E., Novotny, J. Shalf, J. and Laszewski, von G., “The Astrophysics Simulation Collaboratory Portal: A Science Portal Enabling Community Software Development,” Cluster Computing, 5, 2, pp. 297-304, 2002.

    Article  Google Scholar 

  13. UNICORE, http://unicore.sourceforge.net/

  14. Romberg, M., “The UNICORE architecture: Seamless Access to Distributed Resources,” in Proc. of the 8 th IEEE International Symposium on High performance Distributed Computing, pp. 287-293, Redondo Beach, CA, USA, 1999.

  15. Novotny, J., “Developing Grid Portlets using the GridSphere Portal Framework,” IBM Developerworks, 2004.

  16. Kelley, I., Wehrens, O., Russel, M. and Novotny, J., “The Cactus Portal,” in Proc. of Third International Conference on Asian and Pacific Coasts (APAC) 2005: Advanced Computing, Grid Applications and eResearch, pp. 4-8, Seogwipo KAL Hotel, Jeju, Korea, Sep. 2005.

  17. GridPort, http://Gridport.net/main/

  18. Boisseau, J., Mock, S., Thomas, M., “Development of Web Toolkits for Computational Science Portals: The NPACI HotPage,” in Proc. of the 9th IEEE International Symposium on High Performance Distributed Computing, pp. 308-309, Pittsburgh, PA, USA, 2000.

  19. JSR 168 and JSR 286, http://developers.sun.com/portalserver/reference/techart/jsr168/

  20. WSRP, http://www.oasis-open.org/committees/download.php/18617/wsrp-2.0-spec-pr-01.html

  21. WSRP4J, http://portals.apache.org/wsrp4j/

  22. Workflow Management Coalition (WfMC), http://wfmc.org

  23. Taverna, http://taverna.sourceforge.net/

  24. Glatard, T., Montagnat, J., Pennec, X., “An Optimized Workflow Enactor for Data-intensive Grid Applications,” Project RAINBOW, Rapport de recherché, ISRN I3S/RR-2005-32-FR, 2005. Available: http://www.i3s.unice.fr/~ mh/RR/2005/RR-05.32-T.GLATARD.pdf

  25. Yu, J. and Buyya, R., “A Taxonomy of Workflow Management System for Grid Computing,” Tech. rep., Grid and Distributed Systems Laboratory, University of Melbourne, 2005.

  26. Singh, G., Kesselman, C. and Deelman, E., “Optimizing Grid-Based Workflow Execution,” Journal of Grid Computing, 3, 3-4, pp. 201-219, 2005.

    Article  Google Scholar 

  27. Condor DAGMan, http://www.bo.infn.it/calcolo/condor/dagman/

  28. Ludascher, B. et al., “Scientific Workflow Management and the Kepler System,” Special Issue of Concurrency and Computation: Practice and Experience, 2004.

  29. Churches, D., Gombas, G., et al., “Programming Scientific and Distributed Workflow with Triana Services,” Special Issue of Concurrency and Computation: Practice and Experience, 2004.

  30. OMII-UK, http://www.omii.ac.uk/

  31. Jmol, http://jmol.sourceforge.net/

  32. MaterialsGrid, http://www.materialsGrid.org

  33. Pipeline Pilot, http://www.scitegic.com/products/overview/

  34. DWR, http://getahead.org/dwr

  35. Dojo, http://dojotoolkit.org/

  36. Google Web Toolkit, http://code.google.com/webtoolkit/

  37. Microsoft Atlas, http://ajax.asp.net/Default.aspx

  38. Open Rico, http://www.openrico.org/

  39. Yahoo Ajax Library, http://developer.yahoo.com/yui/

  40. Zimbra’s Kabuki AJAX Toolkit, http://www.zimbra.com/community/kabuki_ajax_toolkit_download.html

  41. Segall, M. D., Lindan, P. J. D., Probert, M. J., Pickard, C. J., Hasnip, P. J., Clark, S. J. and Payne, M.C., “First-principles Simulation: Ideas, Illustrations and the CASTEP Code,” J. Phys. Condensed Matter 14, pp. 2717-2744. 2002.

    Google Scholar 

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Correspondence to Xiaoyu Yang.

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Yang, X., Dove, M. & Bruin, R. User-centered Design Practice for Grid-enabled Simulation in e-Science. New Gener. Comput. 28, 147–159 (2010). https://doi.org/10.1007/s00354-008-0082-4

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  • DOI: https://doi.org/10.1007/s00354-008-0082-4

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