Skip to main content
Log in

Sunburst with ordered nodes based on hierarchical clustering: a visual analyzing method for associated hierarchical pesticide residue data

  • Regular Paper
  • Published:
Journal of Visualization Aims and scope Submit manuscript

Abstract

According to the characteristics of pesticide residue data and analyzing requirements in food safety fields, we presented a visual analyzing method for associated hierarchical data, called sunburst with ordered nodes based on hierarchical clustering (SONHC). SONHC arranged the leaf nodes in sunburst in order using hierarchical clustering algorithm, put the associated dataset as a node in center of the sunburst, and connected it with the associated leaf nodes in sunburst using colored lines. So, it can present not only two hierarchical structures but also the relationships between them. Based on SONHC and some interaction techniques (clicking, contraction and expansion, etc) we developed an associated visual analyzing system (AVAS) for pesticide residues detection results data, which can help users to inspect the hierarchical structure of pesticide and agricultural products and to explore the associations between pesticides and agricultural products, and associations between different pesticides. The results of user experience test showed that SONHC algorithm overperforms than SA and SR algorithm in ULE and ULE’s variance. AVAS system is effective in helping users to analyze the pesticide residues data. Furthermore, SONHC algorithm can also be adopted to analyze associated hierarchical data in other fields, such as finance, insurance and e-commerce.

Graphical Abstract

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9
Fig. 10
Fig. 11
Fig. 12
Fig. 13
Fig. 14
Fig. 15
Fig. 16
Fig. 17
Fig. 18

Similar content being viewed by others

References

  • Adamoli A, Hauswirth M (2010) Trevis: A context tree visualization and analysis framework and its use for classifying performance failure reports. In: SoftVis’10: Proceedings of the international symposium on software visualization, pp 73–82

  • Ackermann MR, Blömer J, Kuntze D, Sohler C (2011) Analysis of agglomerative clustering. In: Proceedings of the 28th international symposium on theoretical aspects of computer science (STACS’11), pp 308–319, 2011

  • Brooke J (1996) SUS-A quick and dirty usability scale. Usability Eval Ind 189:194

    Google Scholar 

  • Cao N, Gotz D, Sun J et al (2011) SolarMap: multifaceted visual analytics for topic exploration //data mining (ICDM). In: 2011 IEEE 11th international conference on IEEE, pp 101–110

  • Ceglar A, Roddick J, Calder P (2005) Visualizing hierarchical associations. Knowl Inf Syst 8:257–275

    Article  Google Scholar 

  • Chen Y, Cai JF, Shi YB, Chen HQ (2013) Coordinated visual analytics method based on multiple views with parallel coordinates. J Syst Simul 25(1):81–86

    Google Scholar 

  • Chen Y, Zhang XY, Chen HQ, Feng YC (2014) Hybrid layout algorithm for double interrelated tree. J Syst Simul 26(9):2160–2166

    Google Scholar 

  • Christensen R (1996) One-way ANOVA //plane answers to complex questions. Springer, New York, pp 79–93

    Google Scholar 

  • Gou L, Zhang X (2011) Treenetviz: revealing patterns of networks over tree structures. IEEE Trans Vis Comput Graph 17(12):2449–2458

    Article  Google Scholar 

  • Grahm M, Kennedy J (2008) Multiform views of multiple trees. Information visualization. In: IV’08 12th international conference, pp 252–257, 2008

  • Hofmann H, Siebes APJM, Wilhelm AFX (2000) Visualizing association rules with interactive mosaic plots. In: Proc. Sixth ACM SIGKDD Int’l conf. knowledge discovery and data mining (KDD’00), pp 227–235

  • Holten D (2006) Hierarchical edge bundles: visualization of adjacency relations in hierarchical data. Vis Comput Graph 12(5):741–748

    Article  Google Scholar 

  • Huang M, Nguyen Q (2008) Large graph visualization by hierarchical clustering. J Softw 19(8):1933–1946

    Article  Google Scholar 

  • Itoh T, Takakura H, Sawada A (2006) Hierarchical visualization of network intrusion detection data. IEEE Comput Graph Appl 26:40–47

    Article  Google Scholar 

  • Itoh T, Yamaguchi Y, Ikehata Y (2004) Hierarchical data visualization using a fast rectangle-packing algorithm. IEEE Trans Vis Comput Graph 10:302–313

    Article  Google Scholar 

  • Jia M, Swaminathan S (2009) MetNetGE: visualizing biological networks in hierarchical views and 3D tiered layouts. In: BIBMW’09: Proceedings of the IEEE international conference on bioinformatics and biomedicine workshops, pp 287–294, 2009

  • Klemettinen M, Mannila H, Ronkainen T, Verkano (1994) A finding interesting rules from large sets of discovered association rules. In: 3rd international conference on information and knowledge management (CIKM’94), ACM, Gaithersburg, 401–407, 1994

  • Lam HC, Dinov ID (2012) Hyperbolic wheel: a novel hyperbolic space graph viewer for hierarchical information content. Comput Graph 1–11

  • Lou XH, Liu SX, Wang TS (2008) FanLens: a visual toolkit for dynamically exploring the distribution of hierarchical attributes. In: PacificVis’08: Proceedings of the IEEE pacific visualization symposium, pp 151–158, 2008

  • Neumann P, Schlechtweg S, Carpendale S (2005) ArcTrees: visualizing relations in hierarchical data. In: Eurographics––IEEE VGTC symposium on visualization, pp 1–11

  • Rainsford C, Roddick J (2000) Visualization of temporal interval association rules. In: Proceedings of the 2nd international conference on intelligent data engineering and automated learning, pp 91–96, 2000

  • Sanguthevar R (2005) Efficient parallel hierarchical clustering algorithms. IEEE Trans Parallel Distrib Syst 16(6):497–502

    Article  Google Scholar 

  • Stasko J, Zhang E (2000) Focus+ context display and navigation techniques for enhancing radial, space-filling hierarchy visualizations. In: InfoVis’00: Proceedings of the IEEE symposium on information visualization pp 57–65

  • Schulz HJ, Hadlak S, Schumann H (2011) The design space of implicit hierarchy visualization: a survey. IEEE Trans Vis Comput Graph 17(4):393–411

    Article  Google Scholar 

  • Stasko J (2000) An evaluation of space-filling information visualizations for depicting hierarchical structures. Int J Human-Comput Stud 53:663–694

    Article  MATH  Google Scholar 

  • Tekusova T, Schreck T (2008) Visualizing time-dependent data in multivariate hierarchic plots—design and evaluation of an economic application. In: IV’08: Proceedings of the international conference on information visualization, pp 143–150, 2008

  • Tu Y, Shen HW (2007) Visualizing changes of hierarchical data using treemaps. IEEE Trans Vis Comput Graph 13:1286–1293

    Article  Google Scholar 

  • Wong PC, Whitney P, Thomas J (1999) Visualizing association rules for text mining. In: Proceedings of IEEE symposium on information visualization’99, pp 120–124, 1999

  • Xiao WD, Sun Y, Zhao X (2011) Survey on the research of hierarchy information visualization. J Chinese Comput Syst 1(1):137–146

    Google Scholar 

  • Xu Q, Li C, Xiao B (2009) A visualization algorithm for alarm association mining. In: Network infrastructure and digital content, IC-NIDC 2009. IEEE international conference. IEEE, Beijing, pp 326–330

  • Yang L (2005) Pruning and visualizing generalized association rules in parallel coordinates. IEEE Trans Knowl Data Eng 17(1):60–70

    Article  Google Scholar 

  • Yang J, Ward MO, Rundensteiner EA (2002) Interring: an interactive tool for visually navigating and manipulating hierarchical structures. In: InfoVis’02: Proceedings of the IEEE symposium on information visualization, pp 77–84

  • Zhang X, Yuan XR (2012) Treemap visualization. J Comput-Aided Design Comput Graph 24(9):1113–1124

    MathSciNet  Google Scholar 

Download references

Acknowledgments

This work is supported by “Twelfth Five Year Plan” National Science and Technology Support Program (No. 2012BAD29B01-2), the open funding project of State Key Laboratory of Virtual Reality Technology and Systems, Beihang University (Grant No. BUAA-VR-14KF-04), and the funding of Funding Project for Innovation on Science, Technology and Graduate Education in Institutions of Higher Learning Under the Jurisdiction of Beijing Municipality (Grand No. PXM2014_014213_000043). The authors also would like to thank the conference of China Visual Analytics 2014, which provides exchange platform.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yi Chen.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Chen, Y., Zhang, X., Feng, Y. et al. Sunburst with ordered nodes based on hierarchical clustering: a visual analyzing method for associated hierarchical pesticide residue data. J Vis 18, 237–254 (2015). https://doi.org/10.1007/s12650-014-0269-3

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12650-014-0269-3

Keywords

Navigation