Research articleSupport vector machine with a Pearson VII function kernel for discriminating halophilic and non-halophilic proteins
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Graphical abstract
Abbreviations
Weka
Waikato environment for knowledge analysis
RBF neural network
radial basis function neural network
SVMs
support vector machine
PUFK
Pearson VII universal function kernel
SE
sensitivity
SP
specificity
ACC
accuracy
MCC
Matthew’s correlation coefficient
ROC
receiver operating characteristic
TP
true positives
FN
false negatives
TN
true negatives
FP
false positives
Keywords
Halophile
Pearson VII function kernel
Support vector machine
Amino acid composition
Hypersaline adaptation
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Copyright © 2013 The Authors. Published by Elsevier Ltd.