Original ResearchThe BMS-LM ontology for biomedical data reporting throughout the lifecycle of a research study: From data model to ontology
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Keywords
Provenance
Local terminologies
Data sharing
Research Data Management
Data annotation
Heterogeneous data
Abbreviations
ADQIV
Annotation property, Data property, Quality, data Item, and Value specification
BMS-LM
BioMedical Study – Lifecycle Management
DICOM
Digital Imaging and Communications in Medicine
DMP
Data Management Plan
FAIR
Findable Accessible Interoperable Reusable
KOS
Knowledge Organization System
NCBO Bioportal
National Center for Biomedical Ontology Bioportal (a repository for ontologies)
OBO
Open Biological and Biomedical Ontology
OWL
Ontology Web Language (W3C standard)
PROV-DM
PROVenance Data Model
PET-CT
Positron Emission Tomography – Computed Tomography
RDF
Resource Description Framework
RDM
Research Data Management
SKOS
Simple Knowledge Organization System (W3C standard)
UML
Unified Modeling Language Ontologies
BFO
Basic Formal Ontology
DCM
DICOM Controlled Terminology
DOLCE
Descriptive Ontology for Linguistic and Cognitive Engineering
FBbi
Biological Imaging Methods Ontology
IAO
Information Artifact Ontology
IOBC
Interlinking Ontology for Biological Concepts
MESH
Medical Subject Heading
MS
Mass Spectrometry Ontology
NCIT
National Cancer Institute Thesaurus
OBI
Ontology of Biomedical Investigations
PATIT
PAT placental Investigative Technique
PROV-O
PROVenance Ontology
QIBO
Quantitative Imaging Biomarker Ontology
RO
Relation Ontology
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