An important task in system biology is to understand cellular processes through the lens of gene sets and their expression patterns. Machine learning can help, but genes form complex interaction networks, and levarging this information in machine learning applications requires a sophisticated data representation.
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The authors are supported by the Intramural Research Programs of the National Library of Medicine at National Institutes of Health, USA.
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Hoinka, J., Przytycka, T.M. Embedding gene sets in low-dimensional space. Nat Mach Intell 2, 367–368 (2020). https://doi.org/10.1038/s42256-020-0204-3
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DOI: https://doi.org/10.1038/s42256-020-0204-3