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Parallel DNA sequence assembly | IEEE Conference Publication | IEEE Xplore

Parallel DNA sequence assembly


Abstract:

A heuristic algorithm for the DNA sequence assembly problem is presented. Its sequential implementation is described as well as its parallelization method. A computationa...Show More

Abstract:

A heuristic algorithm for the DNA sequence assembly problem is presented. Its sequential implementation is described as well as its parallelization method. A computational experiment shows how the parallel algorithm speed depends on a number of processes. Tests on real data from experiments with the SARS coronavirus are also discussed, and the outcome of our algorithm appears to be biologically correct.
Date of Conference: 24-24 September 2004
Date Added to IEEE Xplore: 18 October 2004
Print ISBN:0-7695-2160-6
Conference Location: Colima, Mexico

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