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Title: Distributed Workflows for Modeling Experimental Data

Conference ·

Modeling helps explain the fundamental physics hidden behind experimental data. In the case of material modeling, running one simulation rarely results in output that reproduces the experimental data. Often one or more of the force field parameters are not precisely known and must be optimized for the output to match that of the experiment. Since the simulations require high performance computing (HPC) resources and there are usually many simulations to run, a workflow is very useful to prevent errors and assure that the simulations are identical except for the parameters that need to be varied. These workflows are usually distributed because the simulations require HPC, but the optimization and steps to compare the simulation results and experimental data are done on a local workstation. We will present results from force field refinement of data collected at the Spallation Neutron Source using Kepler, Pegasus, and Beam workflows and discuss what we have learned from using these workflows.

Research Organization:
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organization:
USDOE
DOE Contract Number:
AC05-00OR22725
OSTI ID:
1410941
Resource Relation:
Conference: 2017 IEEE High Performance Extreme Computing Conference - Waltham, Massachusetts, United States of America - 9/12/2017 12:00:00 AM-
Country of Publication:
United States
Language:
English

References (7)

BEAM: A Computational Workflow System for Managing and Modeling Material Characterization Data in HPC Environments journal January 2016
PANORAMA: An approach to performance modeling and diagnosis of extreme-scale workflows journal July 2016
Mantid—Data analysis and visualization package for neutron scattering and μ SR experiments
  • Arnold, O.; Bilheux, J. C.; Borreguero, J. M.
  • Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Vol. 764 https://doi.org/10.1016/j.nima.2014.07.029
journal November 2014
Sassena — X-ray and neutron scattering calculated from molecular dynamics trajectories using massively parallel computers journal July 2012
Scalable molecular dynamics with NAMD journal January 2005
Molecular Dynamics Force-Field Refinement against Quasi-Elastic Neutron Scattering Data journal December 2015
An automated analysis workflow for optimization of force-field parameters using neutron scattering data journal July 2017

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