Loading [MathJax]/extensions/TeX/ieeemacros.js
Scaling of parallel multiple sequence alignment on the supercomputer JUQUEEN | IEEE Conference Publication | IEEE Xplore

Scaling of parallel multiple sequence alignment on the supercomputer JUQUEEN


Abstract:

In this paper is proposed optimization, scaling, performance evaluation and profiling of parallel multiple sequence alignment based on ClustalW algorithm on the supercomp...Show More

Abstract:

In this paper is proposed optimization, scaling, performance evaluation and profiling of parallel multiple sequence alignment based on ClustalW algorithm on the supercomputer BlueGene/Q, so-called JUQUEEN, for the case study of the influenza virus sequences. For this purpose a parallel I/O interface for simultaneous and independent access to single file collectively has been designed and verified on the basis of parallel program implementation on the supercomputer JUQUEEN.
Date of Conference: 12-14 September 2013
Date Added to IEEE Xplore: 14 November 2013
ISBN Information:
Conference Location: Berlin, Germany

References

References is not available for this document.