Abstract:
In this paper is proposed optimization, scaling, performance evaluation and profiling of parallel multiple sequence alignment based on ClustalW algorithm on the supercomp...Show MoreMetadata
Abstract:
In this paper is proposed optimization, scaling, performance evaluation and profiling of parallel multiple sequence alignment based on ClustalW algorithm on the supercomputer BlueGene/Q, so-called JUQUEEN, for the case study of the influenza virus sequences. For this purpose a parallel I/O interface for simultaneous and independent access to single file collectively has been designed and verified on the basis of parallel program implementation on the supercomputer JUQUEEN.
Published in: 2013 IEEE 7th International Conference on Intelligent Data Acquisition and Advanced Computing Systems (IDAACS)
Date of Conference: 12-14 September 2013
Date Added to IEEE Xplore: 14 November 2013
ISBN Information: