skip to main content
10.1145/2484028.2484175acmconferencesArticle/Chapter ViewAbstractPublication PagesirConference Proceedingsconference-collections
short-paper

An adaptive evidence weighting method for medical record search

Published:28 July 2013Publication History

ABSTRACT

In this paper, we present a medical record search system which is useful for identifying cohorts required in clinical studies. In particular, we propose a query-adaptive weighting method that can dynamically aggregate and score evidence in multiple medical reports (from different hospital departments or from different tests within the same department) of a patient. Furthermore, we explore several informative features for learning our retrieval model.

References

  1. A. R. Aronson. Effective mapping of biomedical text to the UMLS metathesaurus: The MetaMap program. Proceedings of AMIA Symposium, pages 17--21, 2001.Google ScholarGoogle Scholar
  2. F. Diaz and D. Metzler. Improving the estimation of relevance models using large external corpora. In Proceedings of SIGIR, pages 154--161, 2006. Google ScholarGoogle ScholarDigital LibraryDigital Library
  3. V. Garla and C. Brandt. Semantic similarity in the biomedical domain: an evaluation across knowledge sources. BMC Bioinformatics, 13:261, 2012.Google ScholarGoogle ScholarCross RefCross Ref
  4. W. Hersh. Information Retrieval: A Health and Biomedical Perspective. Health Informatics. Springer, 3rd edition, 2009.Google ScholarGoogle Scholar
  5. N. Limsopatham, C. Macdonald, R. McCreadie, and I. Ounis. Exploiting term dependence while handling negation in medical search. In Proceedings of SIGIR, pages 1065--1066, 2012. Google ScholarGoogle ScholarDigital LibraryDigital Library
  6. N. Limsopatham, C. Macdonald, and I. Ounis. Aggregating evidence from hospital departments to improve medical records search. In Proceedings of ECIR, 2013. Google ScholarGoogle ScholarDigital LibraryDigital Library
  7. N. Limsopatham, C. Macdonald, and I. Ounis. A task-specific query and document representation for medical records search. In Proceedings of ECIR, 2013. Google ScholarGoogle ScholarDigital LibraryDigital Library
  8. D. Metzler and W. B. Croft. A Markov random field model for term dependencies. Proceedings of the 28th annual international ACM SIGIR conference on Research and development in information retrieval, page 472, 2005. Google ScholarGoogle ScholarDigital LibraryDigital Library
  9. D. Sànchez and M. Batet. Semantic similarity estimation in the biomedical domain: An ontology-based information-theoretic perspective. Journal of Biomedical Informatics, 44(5):749--759, 2011. Google ScholarGoogle ScholarDigital LibraryDigital Library
  10. E. M. Voorhees. DRAFT: Overview of the TREC 2012 medical records track. In TREC, 2012.Google ScholarGoogle Scholar
  11. E. M. Voorhees and R. M. Tong. DRAFT: Overview of the TREC 2011 medical records track. In TREC, 2011.Google ScholarGoogle Scholar
  12. D. Zhu and B. Carterette. Combining multi-level evidence for medical record retrieval. In Proceedings of SHB, 2012. Google ScholarGoogle ScholarDigital LibraryDigital Library
  13. D. Zhu and B. Carterette. Exploring evidence aggregation methods and external expansion sources for medical record search. In Proceedings of TREC, 2012.Google ScholarGoogle Scholar

Index Terms

  1. An adaptive evidence weighting method for medical record search

    Recommendations

    Comments

    Login options

    Check if you have access through your login credentials or your institution to get full access on this article.

    Sign in
    • Published in

      cover image ACM Conferences
      SIGIR '13: Proceedings of the 36th international ACM SIGIR conference on Research and development in information retrieval
      July 2013
      1188 pages
      ISBN:9781450320344
      DOI:10.1145/2484028

      Copyright © 2013 ACM

      Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

      Publisher

      Association for Computing Machinery

      New York, NY, United States

      Publication History

      • Published: 28 July 2013

      Permissions

      Request permissions about this article.

      Request Permissions

      Check for updates

      Qualifiers

      • short-paper

      Acceptance Rates

      SIGIR '13 Paper Acceptance Rate73of366submissions,20%Overall Acceptance Rate792of3,983submissions,20%

    PDF Format

    View or Download as a PDF file.

    PDF

    eReader

    View online with eReader.

    eReader