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Evolutionary Algorithm Based on Overlapped Gene Expression

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Advances in Natural Computation (ICNC 2005)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3612))

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Abstract

Inspired by the overlap gene expression in biological study, this paper proposes a novel evolutionary algorithm-EAOGE i.e. Evolutionary Algorithm based on Overlapped Gene Expression. Different from existing works, EAOGE suggests a new expression structure of genes with probabilities of overlapped expression for some segments. The main contributions are: (1) Proposing a novel model and an algorithm of gene expression while borrowing some ideas from artificial immunity algorithm; (2) Analyzing the expressing space and encode characteristic of the new model; (3) The extensive experiments in function finding shows that new model is 2.8~9.7 times faster than usual GEP method, and in higher-degree polynomial function finding, the success rate of EAOGE is over 10 times than usual GEP.

This paper was supported by Grant of National Science Foundation of China (60073046), Sichuan Major Science and Technology Project (04SG1640).

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References

  1. Keith, M.J., Martin, M.C.: Genetic Programming in C++: Implementation Issues. In: Kinnear, K.E. (ed.) Advances in Genetic Programming. MIT Press, Cambridge (1994)

    Google Scholar 

  2. O’Reilly, U.-M., Oppacher, F.: A comparative analysis of genetic programming. In: Angeline, P.J., Kinnear, K.E. (eds.) Advances in Genetic Programming, vol. 2. MIT Press, Cambridge (1996)

    Google Scholar 

  3. Ferreira, C.: Gene Expression Programming: A New Adaptive Algorithm for Solving Problems. Complex Systems 13(2), 87–129 (2001)

    MATH  MathSciNet  Google Scholar 

  4. Ferreira, C.: Gene Expression Programming: Mathematical Modeling by an Artificial Intelligence [OL] (2002), http://www.gene-expression-programming.com/gep/GepBook/Introduction.htm

  5. Cormen, T.H., Leiserson, C.E., Rivest, R.L., Stein, C.: Introduction to Algorithms, pp. 184–189. Higher Education Press, Beijing (2002)

    Google Scholar 

  6. Ferreira, C.: Gene Expression Programming in Problem Solving [OL] (2001), http://www.gene-expression-programming.com/gep/webpapers/Ferreira-WSC2001/Introduction.htm

  7. Ferreira, C.: Mutation, Transposition, and Recombination: An Analysis of the Evolutionary Dynamics. In: 4th International Workshop on Frontiers in Evolutionary Algorithms, Research Triangle Park, North Carolina, USA, pp. 614–661 (2002)

    Google Scholar 

  8. Ferreira, C.: Discovery of the Boolean Functions to the Best Density-Classification Rules Using Gene Expression Programming. In: Foster, J.A., Lutton, E., Miller, J., Ryan, C., Tettamanzi, A.G.B. (eds.) EuroGP 2002. LNCS, vol. 2278, pp. 51–60. Springer, Heidelberg (2002)

    Chapter  Google Scholar 

  9. Zuo, J., Tang, C., Li, C., Yuan, C.-a., Chen, A.-l.: Time Series Prediction based on Gene Expression Programming. In: Li, Q., Wang, G., Feng, L. (eds.) WAIM 2004. LNCS, vol. 3129, pp. 55–64. Springer, Heidelberg (2004)

    Chapter  Google Scholar 

  10. Avers, C.J.: Genetics, 2nd edn. Willard Grant press (1991)

    Google Scholar 

  11. Lu, G., De-jian, T.: Improvement on regulating definition of antibody density of immune algorithm. In: Proceedings of the 9th international conference on neural information processing (ICONIP 2002), vol. 5, pp. 2669–2672 (2002)

    Google Scholar 

  12. The extended version of this paper with appendix, http://211.83.120.2/~tangchangjie/buf/download/pj/OverlappeGEP.pdf

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© 2005 Springer-Verlag Berlin Heidelberg

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Peng, J., Tang, Cj., Zhang, J., Yuan, Ca. (2005). Evolutionary Algorithm Based on Overlapped Gene Expression. In: Wang, L., Chen, K., Ong, Y.S. (eds) Advances in Natural Computation. ICNC 2005. Lecture Notes in Computer Science, vol 3612. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11539902_23

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  • DOI: https://doi.org/10.1007/11539902_23

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-28320-1

  • Online ISBN: 978-3-540-31863-7

  • eBook Packages: Computer ScienceComputer Science (R0)

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