Abstract
The Distributed Annotation System (DAS) is a protocol for sharing of biological data which allows for dynamical data integration. It has become widely used in both the genome and protein bioinformatics communities. Here we provide an overview of the available DAS infrastructure and present our latest developments, including a registration server that facilitates service discovery by DAS clients while automatically monitoring service availability. Currently there are 108 registered DAS servers, provided by 24 institutions in 10 countries.
This is a preview of subscription content, log in via an institution to check access.
Preview
Unable to display preview. Download preview PDF.
Similar content being viewed by others
References
Dowell, R.D., Jokerst, R.M., Day, A., Eddy, S.R., Stein, L.: The distributed annotation system. BMC Bioinformatics 2, p. 7 (2001)
Birney, E., Andrews, D., Caccamo, M., Chen, Y., Clarke, L., Coates, G., Cox, T., Cunningham, F., Curwen, V., Cutts, T., Down, T., Durbin, R., Fernandez-Suarez, X.M., Flicek, P., Gräf, S., Hammond, M., Herrero, J., Howe, K., Iyer, V., Jekosch, K., Kähäri, A., Kasprzyk, A., Keefe, D., Kokocinski, F., Kulesha, E., London, D., Longden, I., Melsopp, C., Meidl, P., Overduin, B., Parker, A., Proctor, G., Prlić, A., Rae, M., Rios, D., Redmond, S., Schuster, M., Sealy, I., Searle, S., Severin, J., Slater, G., Smedley, D., Smith, J., Stabenau, A., Stalker, J., Trevanion, S., Ureta-Vidal, A., Vogel, J., White, S., Woodwark, C., Hubbard, T.J.P.: Ensembl 2006. Nucleic Acids Res. 34, (Database issue), 556–561 (2006)
Prlić, A., Down, T.A., Hubbard, T.J.P.: Adding Some SPICE to DAS. Bioinformatics 21(suppl. 2), ii40–ii41 (2005)
Jones, P., Vinod, N., Down, T., Hackmann, A., Kahari, A., Kretschmann, E., Quinn, A., Wieser, D., Hermjakob, H., Apweiler, R.: Dasty and UniProt DAS: a perfect pair for protein feature visualization. Bioinformatics 21(14), 3198–3199 (2005)
Olason, P.I.: Integrating protein annotation resources through the Distributed Annotation System. Nucleic Acids Res. 33, (web server issue), W468–W470 (2005)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2006 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Prlić, A. et al. (2006). The Distributed Annotation System for Integration of Biological Data. In: Leser, U., Naumann, F., Eckman, B. (eds) Data Integration in the Life Sciences. DILS 2006. Lecture Notes in Computer Science(), vol 4075. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11799511_17
Download citation
DOI: https://doi.org/10.1007/11799511_17
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-36593-8
Online ISBN: 978-3-540-36595-2
eBook Packages: Computer ScienceComputer Science (R0)