Skip to main content

A Simple Greedy Algorithm for Finding Functional Relations: Efficient Implementation and Average Case Analysis

  • Conference paper
  • First Online:
Discovery Science (DS 2000)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 1967))

Included in the following conference series:

Abstract

Inferring functional relations from relational databases is important for discovery of scientific knowledge because many experimental data in science are represented in the form of tables and many rules are represented in the form of functions. A simple greedy algorithm has been known as an approximation algorithm for this problem. In this algorithm, the original problem is reduced to the set cover problem and a well-known greedy algorithm for the set cover is applied. This paper shows an efficient implementation of this algorithm that is specialized for inference of functional relations. If one functional relation for one output variable is required, each iteration step of the greedy algorithm can be executed in linear time. If functional relations for multiple output variables are required, it uses fast matrix multiplication in order to obtain non-trivial time complexity bound. In the former case, the algorithm is very simple and thus practical. This paper also shows that the algorithm can find an exact solution for simple functions if input data for each function are generated uniformly at random and the size of the domain is bounded by a constant. Results of preliminary computational experiments on the algorithm are described too.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Agrawal, R., Imielinski, T., Swami, A.: Mining association rules between sets of items in large databases. Proc. ACM SIGMOD Conference on Management of Data (1993) 207–216

    Google Scholar 

  2. Akutsu, T., Takasu, A.: Inferring approximate functional dependencies from example data. Proc. AAAI93 Workshop on Knowledge Discovery in Databases (1993) 138–152

    Google Scholar 

  3. Akutsu, T., Bao, F.: Approximating minimum keys and optimal substructure screens. Lecture Notes in Computer Science 1090 (1996) 290–299

    Google Scholar 

  4. Akutsu, T., Miyano, S., Kuhara, S.: Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function. Proc. 4th ACM Conf. Computational Molecular Biology (2000) 8–14

    Google Scholar 

  5. Akutsu, T., Miyano, S.: Selecting informative genes for cancer classification using gene expression data, Unpublished Manuscript.

    Google Scholar 

  6. Coppersmith, D., Winograd, S.: Matrix multiplication via arithmetic progression. J. Symbolic Computation 9 (1990) 251–280

    Article  MATH  MathSciNet  Google Scholar 

  7. Cormen, T.H., Leiserson, C.E., Rivest, R.L.: Introduction to Algorithms. The MIT Press, Cambridge, MA (1990)

    MATH  Google Scholar 

  8. Johnson, D.S.: Approximation algorithms for combinatorial problems. J. Computer and System Sciences 9 (1974) 256–278

    Article  MATH  Google Scholar 

  9. Kivinen, J., Mannila, J.: Approximate dependency inference from relations. Proc. 4th Int. Conf. Database Theory (1992) 86–98

    Google Scholar 

  10. Mannila, H., Räihä, K.: Dependency inference. Proc. 13th VLDB Conference(1987) 155–158

    Google Scholar 

  11. Mannila, H., Räihä, K.: On the complexity of inferring functional dependencies. Discrete Applied Mathematics 40 (1992) 237–243

    Article  MATH  MathSciNet  Google Scholar 

  12. Quinlan, J. R.: C4.5 Programs for Machine Learning. (1993) Morgan Kaufmann

    Google Scholar 

  13. Somogyi, R., Sniegoski, C. A.: Modeling the complexity of genetic networks: Understanding multigene and pleiotropic regulation. Complexity 1 (1996) 45–63

    MathSciNet  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2000 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Akutsu, T., Miyano, S., Kuhara, S. (2000). A Simple Greedy Algorithm for Finding Functional Relations: Efficient Implementation and Average Case Analysis. In: Arikawa, S., Morishita, S. (eds) Discovery Science. DS 2000. Lecture Notes in Computer Science(), vol 1967. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-44418-1_8

Download citation

  • DOI: https://doi.org/10.1007/3-540-44418-1_8

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-41352-3

  • Online ISBN: 978-3-540-44418-3

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics