Skip to main content

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 11395))

  • 1846 Accesses

Abstract

Models of sheets in the heart wall play an important role in the visualization of myofiber geometry, in modelling mechanics and in cardiac electrophysiology. For example, the assumption of distinct speeds of propagation in the directions of myofibers, the sheets in which they lie, and the direction across them, can predict the arrival time of the conduction wave that triggers myocyte contraction. Almost all current analyses based on DTI data use the third eigenvector of the diffusion tensor as an estimate of the local sheet normal. This construction suffers from the limitation that the second and third eigenvector directions can be ambiguous since they are associated with eigenvalues that are quite similar. Here we present and evaluate an alternate method to estimate sheets, which uses only the principal eigenvector. We find the best local direction perpendicular to the principal eigenvector to span a sheet, using the Lie bracket and the minimization of an appropriately constructed energy function. We test our method on a dataset of 8 ex vivo rat and 8 ex vivo canine cardiac diffusion tensor images. Qualitatively the recovered sheets are more consistent with the geometry of myofibers than those obtained using all three eigenvectors, particularly when they curve or fan. Quantitatively the recovered sheet normals also give a low value of holonomicity, a measure of the degree to which they are orthogonal to a family of surfaces. Our novel fitting approach could thus impact cardiac mechanical and electrophysiological analyses which are based on DTI data.

T. A. Syed and B. Samari—Equal contribution.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Aminov, Y.: Geometry of Vector Fields. CRC Press, Boca Raton (2000)

    MATH  Google Scholar 

  2. Dou, J., Tseng, W.Y.I., Reese, T.G., Wedeen, V.J.: Combined diffusion and strain MRI reveals structure and function of human myocardial laminar sheets in vivo. Magn. Reson. Med. 50(1), 107–113 (2003)

    Article  Google Scholar 

  3. Eriksson, T.S., Prassl, A., Plank, G., Holzapfel, G.A.: Influence of myocardial fiber/sheet orientations on left ventricular mechanical contraction. Math. Mech. Solids 18(6), 592–606 (2013)

    Article  MathSciNet  Google Scholar 

  4. Gilbert, S.H., et al.: Visualization and quantification of whole rat heart laminar structure using high-spatial resolution contrast-enhanced MRI. Am. J. Phys.-Heart Circ. Physiol. 302(1), H287–H298 (2011)

    Article  Google Scholar 

  5. Helm, P., Beg, M.F., Miller, M.I., Winslow, R.L.: Measuring and mapping cardiac fiber and laminar architecture using diffusion tensor MR imaging. Ann. NY Acad. Sci. 1047(1), 296–307 (2005)

    Article  Google Scholar 

  6. LeGrice, I.J., Smaill, B.H., Chai, L.Z., Edgar, S.G., Gavin, J.B., Hunter, P.J.: Laminar structure of the heart: ventricular myocyte arrangement and connective tissue architecture in the dog. Am. J. Physiol. 269(2), H571–82 (1995)

    Google Scholar 

  7. Lombaert, H., et al.: Human atlas of the cardiac fiber architecture: study on a healthy population. IEEE Trans. Med. Imaging 31(7), 1436–1447 (2012)

    Article  MathSciNet  Google Scholar 

  8. Nash, M.P., Hunter, P.J.: Computational mechanics of the heart. J. Elast. Phys. Sci. Solids 61(1–3), 113–141 (2000)

    MATH  Google Scholar 

  9. Peyrat, J.M., et al.: A computational framework for the statistical analysis of cardiac diffusion tensors: application to a small database of canine hearts. IEEE Trans. Med. Imaging 26(11), 1500–1514 (2007). https://doi.org/10.1109/TMI.2007.907286

    Article  Google Scholar 

  10. Rohmer, D., Sitek, A., Gullberg, G.T.: Reconstruction and visualization of fiber and laminar structure in the normal human heart from ex vivo diffusion tensor magnetic resonance imaging (DTMRI) data. Invest. Radiol. 42(11), 777–789 (2007)

    Article  Google Scholar 

  11. Savadjiev, P., Strijkers, G.J., Bakermans, A.J., Piuze, E., Zucker, S.W., Siddiqi, K.: Heart wall myofibers are arranged in minimal surfaces to optimize organ function. Proc. Natl. Acad. Sci. 109(24), 9248–9253 (2012)

    Article  Google Scholar 

  12. Tax, C.M., et al.: Sheet probability index (SPI): characterizing the geometrical organization of the white matter with diffusion MRI. NeuroImage 142, 260–279 (2016)

    Article  Google Scholar 

  13. Young, R.J., Panfilov, A.V.: Anisotropy of wave propagation in the heart can be modeled by a riemannian electrophysiological metric. Proc. Natl. Acad. Sci. 107(34), 15063–15068 (2010)

    Article  Google Scholar 

Download references

Acknowledgements

We thank the reviewers for many insightful comments and suggestions. We are grateful to the Natural Sciences and Engineering Research Council of Canada for research funding.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tabish A. Syed .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Syed, T.A., Samari, B., Siddiqi, K. (2019). Estimating Sheets in the Heart Wall. In: Pop, M., et al. Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges. STACOM 2018. Lecture Notes in Computer Science(), vol 11395. Springer, Cham. https://doi.org/10.1007/978-3-030-12029-0_1

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-12029-0_1

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-12028-3

  • Online ISBN: 978-3-030-12029-0

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics