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Artefacts Recognition and Elimination in Video Sequences with Ciliary Respiratory Epithelium

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Bioinformatics and Biomedical Engineering (IWBBIO 2019)

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 11466))

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Abstract

The ciliary respiratory epithelium analysis is performed to detect of possible malfunction of cilia. The moving cilia is investigated and their movement is automatically evaluated. The areas with moving cilia is marked in video sequences. When the moving cilia is searched in some cases the false detection can be occur. It means that area with no cilia is marked as ciliated epithelium. These errors are caused by artefacts. The most frequent artefacts are erythrocytes and air bubbles. Article deals with techniques that helps to find artefacts which are responsible for false detection of movement. The used techniques for artefacts detection are based on pattern matching and geometrical matching. The results of designed algorithms are compared in the conclusion of this article. The main idea of this work is to create complex diagnostic tool for evaluation of ciliated epithelium in airways. This work is supported by medical specialists from Jessenius Faculty of Medicine in Martin (Slovakia) and proposed tools would fill the gap in the diagnostics in the field of respirology in Slovakia.

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References

  1. Trojan, S., et al.: Lékařská fyziologie, 4th edn. Grada Publishing, Praha (2003). ISBN 80-247-0512-5

    Google Scholar 

  2. Nečas, E., Šulc, K., Vokurka, M.: Patologická fyziologie orgánových systémů. Nakladatelství Karolinum, Praha (2006). ISBN 80-246-0675-5

    Google Scholar 

  3. Silbernagl, S., Despopoulos, A.: Atlas fyzilogie člověka, 8th edn. Grada Publishing, Praha (2016). ISBN 978-80-247-4271-7

    Google Scholar 

  4. Babinec, A., Jurisica, L., Hubinsky, P., Duchon, F.: Visual localization of mobile robot using artificial markers, modelling of mechanical and mechatronic systems. Procedia Eng. 96, 1–9 (2014). https://doi.org/10.1016/j.proeng.2014.12.091

    Article  Google Scholar 

  5. Yum, Y.J., Hwang, H., Kelemen, M., Maxim, V., Frankovsky, P.: In-pipe micromachine locomotion via the inertial stepping principle. J. Mech. Sci. Technol. 28(8), 3237–3247 (2014). https://doi.org/10.1007/s12206-014-0734-x

    Article  Google Scholar 

  6. NI Vision Concepts Manual. National Instruments (2007)

    Google Scholar 

  7. Bow, S.T.: Pattern Recognition and Image Preprocessing, 2nd edn. Marcel Dekker, New York City (2002). ISBN 0-8247-0659-5

    Book  Google Scholar 

  8. Zhang, X., Feng, X., Xiao, P., He, G., Zhu, L.: Segmentation quality evaluation using region-based precision and recall measures for remote sensing images. ISPRS J. Photogram. Remote Sens. 102, 73–84 (2015). ISSN 0924-2716

    Article  Google Scholar 

  9. Morstatter, F., Wu, L., Nazer, T.H., Carley, K.M., Liu, H.: A new approach to bot detection: striking the balance between precision and recall. In: Advances in Social Networks Analysis and Mining (2016). ISSN: 1869-5469

    Google Scholar 

  10. Yingchareonthawornchai, S., Nguyen, D.N., Valapil, V.T., Kulkarni, S.S., Demirbas, M.: Precision, recall, and sensitivity of monitoring partially synchronous distributed systems. In: Falcone, Y., Sánchez, C. (eds.) RV 2016. LNCS, vol. 10012, pp. 420–435. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-46982-9_26

    Chapter  Google Scholar 

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Acknowledgement

Authors of this paper wish to kindly thank to all supporting bodies, especially to grant APVV-15-0462: Research on sophisticated methods for analysing the dynamic properties of respiratory epithelium’s microscopic elements.

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Correspondence to Libor Hargas .

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Hargas, L., Loncova, Z., Koniar, D., Jabloncik, F., Volak, J. (2019). Artefacts Recognition and Elimination in Video Sequences with Ciliary Respiratory Epithelium. In: Rojas, I., Valenzuela, O., Rojas, F., Ortuño, F. (eds) Bioinformatics and Biomedical Engineering. IWBBIO 2019. Lecture Notes in Computer Science(), vol 11466. Springer, Cham. https://doi.org/10.1007/978-3-030-17935-9_41

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  • DOI: https://doi.org/10.1007/978-3-030-17935-9_41

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-17934-2

  • Online ISBN: 978-3-030-17935-9

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