Skip to main content

A Numerical Method for the Optimal Adjustment of Parameters in Ionic Models Accounting for Restitution Properties

  • Conference paper
  • First Online:
Functional Imaging and Modeling of the Heart (FIMH 2019)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 11504))

  • 1268 Accesses

Abstract

We developed new numerical methods to optimally adjust the parameters in cardiac electrophysiology models, using optimal control and non-differentiable optimization methods. We define an optimal control problem to adjust parameters in single-cell models so that the trans-membrane potential predicted by a model fits in a least-square (LS) sense the potential recorded over time. To account for restitution properties, this LS function measures the discrepancy between predictions and experiments for a cell paced at various heart rates (HR) of increasing frequency. The methodology is used to adjust parameters in the Mitchell-Schaeffer model to unscaled non-smoothed experimental recording of the trans-membrane potential obtained in pig heart using optical fluorescence imaging based on voltage-sensitive dye, and simultaneously identify scaling factors for the experimental data. The methodology is validated by adjusting the model for multiple heart beats at a single HR. The fit for a single HR is excellent (LS function = 0.0065–0.02). The methodology is applied to adjust the MS model to multiple heart beats at three different HR. It is observed that the fit remains good when the range of HR is moderately large (LS function = 0.052), while a larger HR gap is more challenging (LS function = 0.17).

Supported by the National Science and Engineering Council of Canada.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 59.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 79.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Chong, E.K.P., Zak, S.H.: An Introduction to Optimization, 3rd edn. Wiley, Hoboken (2008)

    Book  Google Scholar 

  2. W. Groenendaal et al.: Cell-specific cardiac electrophysiology models. PLOS Comput. Biol. 22 pages (2015)

    Google Scholar 

  3. Kaur, J., Nygren, A., Vigmond, E.J.: Fitting membrane resistance along with action potential shape in cardiac myocytes improves convergence: application of a multi-objective parallel genetic algorithm. PLOS One 9(9), 1–10 (2014)

    Article  Google Scholar 

  4. Kolda, T.G., Lewis, R.M., Torczon, V.: Optimization by direct search: new perspectives on some classical and modern methods. SIAM Rev. 45(3), 385–482 (2003)

    Article  MathSciNet  Google Scholar 

  5. Lombardo, D.M., Fenton, F.H., Narayan, S.M., Rappel, W.-J.: Comparison of detailed and simplified models of human atrial myocytes to recapitulate patient specific properties. PLOS Comput. Biol. 15 pages (2016)

    Google Scholar 

  6. Mitchell, C.C., Schaeffer, D.G.: A two-current model for the dynamics of cardiac membrane. Bull. Math. Biol. 65(5), 767–793 (2003)

    Article  Google Scholar 

  7. Pongui Ngoma, D.V., Bourgault, Y., Pop, M., Nkounkou, H.: Adjustment of parameters in ionic models using optimal control problems. In: Pop, M., Wright, G.A. (eds.) FIMH 2017. LNCS, vol. 10263, pp. 322–332. Springer, Cham (2017). https://doi.org/10.1007/978-3-319-59448-4_31

    Chapter  Google Scholar 

  8. Pongui-Ngoma, D.V., Bourgault, Y., Nkounkou, H.: Parameter identification for a non-differentiable ionic model used in cardiac electrophysiology. Appl. Math. Sci. 9(150), 7483–7507 (2015)

    Google Scholar 

  9. Pop, M., et al.: Fusion of optical imaging and MRI for the evaluation and adjustment of macroscopic models of cardiac electrophysiology: a feasibility study. Med Image Anal. 13(2), 370–80 (2009)

    Article  Google Scholar 

  10. Relan, J., Pop, M., Delingette, H., Wright, G., Ayache, N., Sermesant, M.: Personalization of a cardiac electrophysiology model using optical mapping and MRI for prediction of changes with pacing. IEEE Trans. Biomed. Eng. 10(10), 11 pages (2011)

    Google Scholar 

  11. Relan, J., et al.: Coupled personalization of cardiac electrophysiology models for prediction of ischaemic ventricular tachycardia. Interface Focus 1, 396–407 (2011)

    Article  Google Scholar 

  12. Rioux, M., Bourgault, Y.: A predictive method allowing the use of a single ionic model in numerical cardiac electrophysiology. ESAIM: Math. Modell. Numer. Anal. 47, 987–1016 (2013)

    Article  MathSciNet  Google Scholar 

  13. Syed, Z., Vigmond, E., Nattel, S., Leon, L.J.: Atrial cell action potential parameter fitting using genetic algorithms. Med. Biol. Eng. Comput. 43, 561–571 (2005)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yves Bourgault .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Pearce-Lance, J., Pop, M., Bourgault, Y. (2019). A Numerical Method for the Optimal Adjustment of Parameters in Ionic Models Accounting for Restitution Properties. In: Coudière, Y., Ozenne, V., Vigmond, E., Zemzemi, N. (eds) Functional Imaging and Modeling of the Heart. FIMH 2019. Lecture Notes in Computer Science(), vol 11504. Springer, Cham. https://doi.org/10.1007/978-3-030-21949-9_6

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-21949-9_6

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-21948-2

  • Online ISBN: 978-3-030-21949-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics