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Probing Multi-way Chromatin Interaction with Hypergraph Representation Learning

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Research in Computational Molecular Biology (RECOMB 2020)

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 12074))

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Abstract

Advances in high-throughput mapping of 3D genome organization have enabled genome-wide characterization of chromatin interactions. However, proximity ligation based mapping approaches for pairwise chromatin interaction such as Hi-C cannot capture multi-way interactions, which are informative to delineate higher-order genome organization and gene regulation mechanisms at single-nucleus resolution.

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Correspondence to Jian Ma .

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Zhang, R., Ma, J. (2020). Probing Multi-way Chromatin Interaction with Hypergraph Representation Learning. In: Schwartz, R. (eds) Research in Computational Molecular Biology. RECOMB 2020. Lecture Notes in Computer Science(), vol 12074. Springer, Cham. https://doi.org/10.1007/978-3-030-45257-5_37

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  • DOI: https://doi.org/10.1007/978-3-030-45257-5_37

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-45256-8

  • Online ISBN: 978-3-030-45257-5

  • eBook Packages: Computer ScienceComputer Science (R0)

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