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An Approach for Progressive Set Similarity Join with GPU Accelerating

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Web Information Systems and Applications (WISA 2020)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 12432))

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Abstract

Set similarity join (SSJoin) is an important operation for searching similarity set pairs from the given database and play a core role in data integration, data cleaning, and data mining. In contrast to the traditional SSJoin methods, progressive SSJoin aims to resolve large datasets so that the efficiency of finding similarity pairs in the limited running time is improved. Progressive SSJoin can provide possible partial matching pairs of the dataset as early as possible in the processing. Moreover, recent research has shown that GPUs (Graphics Processing Units) can accelerate the similarity operation. This paper focuses on exploring progressive SSJoin algorithms and accelerating them with GPUs. We proposes two progressive SSJoin methods, PSSJM and PBM. PSSJM uses inverted index and PBM achieves its required functions by utilizing counting Bloom filter and prefix filtering techniques. In addition, we proposed a GPUs-based algorithm based on our proposed progressive method to accelerate the computation. Comprehensive experiments with real-world datasets show that our methods can generate better quality results than the traditional method under limited time and the method implementing on GPUs has high speedups over CPU-base method.

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References

  1. Chaudhuri, S., Ganti, V., Kaushik, R..: A primitive operator for similarity joins in data cleaning. In: Proceedings of the ICDE, pp. 5–16 (2006)

    Google Scholar 

  2. Xiao, C., Wang, W., Lin, X., Yu, J.X., Wang, G.: Efficient similarity joins for near-duplicate detection. TODS 36(3), 15 (2011)

    Article  Google Scholar 

  3. Arasu, A., Ganti, V., Kaushik, R.: Efficient exact set-similarity joins. In: Proceedings of the VLDB, pp. 918–929 (2006)

    Google Scholar 

  4. Mann, W., Augsten, N.: PEL: Position-enhanced length filter for set similarity joins. In: Proceedings of the GvD (Foundations of Databases), pp. 89–94 (2014)

    Google Scholar 

  5. MannMann, W., Augsten, N., Bouros, P.: An empirical evaluation of set similarity join techniques. Proc. VLDB End. 9, 636–647 (2016)

    Article  Google Scholar 

  6. Zhou, J., et al.: A generic inverted index framework for similarity search on the GPU. In: 2018 IEEE 34th International Conference on Data Engineering (ICDE). IEEE (2018)

    Google Scholar 

  7. Sandes, E.F.O., Teodoro, G., Melo, A.C.M.A.: Bitmap filter: Speeding up exact set similarity joins with bitwise operations. (2017)

    Google Scholar 

  8. Li, C., et al.: A GPU Accelerated Update Efficient Index for kNN queries in road networks. In: 2018 IEEE 34th International Conference on Data Engineering (ICDE). IEEE Computer Society (2018)

    Google Scholar 

  9. Kruliš, M., Osipyan, H., Marchand-Maillet, S.: Optimizing sorting and Top-k selection steps in permutation based indexing on GPUs. In: Morzy, T., Valduriez, P., Bellatreche, L. (eds.) ADBIS 2015. CCIS, vol. 539, pp. 305–317. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-23201-0_33

    Chapter  Google Scholar 

  10. Wang, Y., et al.: FLASH: Randomized algorithms accelerated over CPU-GPU for ultra-high dimensional similarity search (2017)

    Google Scholar 

  11. Gowanlock, M., Casanova, H.: Distance threshold similarity searches: Efficient trajectory indexing on the GPU. IEEE Trans. Parallel Distrib. Syst. 27(9), 2533–2545 (2016)

    Article  Google Scholar 

  12. Xiao, C., et al.: Top-k set similarity joins. In: Proceedings of the 25th International Conference on Data Engineering, ICDE 2009, March 29 2009–April 2 2009, Shanghai, China. IEEE Computer Society (2009)

    Google Scholar 

  13. Vernica, R., Carey, M.J., Li, C.: Efficient parallel set-similarity joins using mapreduce. In: Proceedings of the ACM SIGMOD International Conference on Management of Data, SIGMOD 2010, Indianapolis, Indiana, USA, June 6–10, 2010. ACM (2010)

    Google Scholar 

  14. Ma, Y., Zhang, R., Zhang, Y.: Similarity histogram estimation based top-k similarity join algorithm on high-dimensional data. In: Ni, W., Wang, X., Song, W., Li, Y. (eds.) WISA 2019. LNCS, vol. 11817, pp. 589–600. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-30952-7_60

    Chapter  Google Scholar 

  15. Papenbrock, T., Heise, A., Naumann, F.: Progressive duplicate detection. IEEE Trans. Knowl. Data Eng. 27(5), 1316–1329 (2015)

    Article  Google Scholar 

  16. Whang, S.E., Marmaros, D., Garcia-Molina, H.: Pay-as-you-go entity resolution. IEEE TKDE 25(5), 1111–1124 (2013)

    Google Scholar 

  17. Giovanni, S., George, P., Themis, P., et al.: Schema-agnostic progressive entity resolution. IEEE Trans. Knowl. Data Eng. 31(6), 1208–1221 (2018)

    Google Scholar 

  18. Hernández, M.A., Stolfo, S.J.: The merge/purge problem for large databases. In: SIGMOD, pp. 127–138 (1995)

    Google Scholar 

  19. Bloom, B.: Space/time tradeoffs in hash coding with allowable errors. Commun. ACM 13(7), 422–426 (1970)

    Article  Google Scholar 

  20. Christen, P.: A survey of indexing techniques for scalable set linkage and deduplication. IEEE TKDE 24(9), 1537–1555 (2012)

    Google Scholar 

  21. Nvidia. Nvidia CUDA Programming Guide 8.0.Nvidia (2017)

    Google Scholar 

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Acknowledgments

This work is supported by the Nation Key R&D Program of China (2018YFB1003404), the National Nature Science Foundation of China (61672142, U1811261).

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Correspondence to Lining Yu .

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Yu, L., Nie, T., Shen, D., Kou, Y. (2020). An Approach for Progressive Set Similarity Join with GPU Accelerating. In: Wang, G., Lin, X., Hendler, J., Song, W., Xu, Z., Liu, G. (eds) Web Information Systems and Applications. WISA 2020. Lecture Notes in Computer Science(), vol 12432. Springer, Cham. https://doi.org/10.1007/978-3-030-60029-7_14

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  • DOI: https://doi.org/10.1007/978-3-030-60029-7_14

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  • Online ISBN: 978-3-030-60029-7

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