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Dilated ResFCN and SE-Unet for Polyp Segmentation

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Computer-Aided Analysis of Gastrointestinal Videos

Abstract

Segmentation is one of the key enabling technologies in medical image analysis with a great variety of methods proposed (Histace et al. 2009; Zhang et al. 2010, 2013; Matuszewski et al. 2011). Methods based on deep learning, with the features learned directly from data rather than handcrafted, showed significant improvement in the quality of the segmentation including the analysis of colonoscopy images.

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References

  • Chen, L.-C., Papandreou, G., Kokkinos, I., Murphy, K., & Yuille, A. L. (2017). DeepLab: Semantic image segmentation with deep convolutional nets, atrous convolution, and fully connected CRFs. IEEE Transactions on Pattern Analysis and Machine Intelligence, 40(4), 834–848.

    Article  Google Scholar 

  • Deep residual networks. https://github.com/KaimingHe/deep-residual-networks. Retrieved 03 August 2017.

  • Glorot, X., & Bengio, Y. (2010). Understanding the difficulty of training deep feedforward neural networks. In Proceedings of the Thirteenth International Conference on Artificial Intelligence and Statistics (pp. 249–256).

    Google Scholar 

  • Guo, Y., & Matuszewski, B. J. (2020). Polyp segmentation with fully convolutional deep dilation neural network. In Zheng, Y., Williams, B., Chen, K. (Eds.) Medical Image Understanding and Analysis. MIUA (2019). Communications in Computer and Information Science, vol 1065. Springer, Cham

    Google Scholar 

  • Guo, Y. B. (2019). Polyp segmentation in colonoscopy images with convolutional neural networks. Ph.D. thesis, University of Central Lancashire.

    Google Scholar 

  • Guo, Y. B., & Matuszewski, B. (2019). GIANA polyp segmentation with fully convolutional dilation neural networks. In Proceedings of the 14th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications (pp. 632–641). SCITEPRESS-Science and Technology Publications.

    Google Scholar 

  • He, K., Zhang, X., Ren, S., & Sun, J. (2016). Deep residual learning for image recognition. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (pp. 770–778).

    Google Scholar 

  • Histace, A., Matuszewski, B. J., & Zhang, Y. (2009). Segmentation of myocardial boundaries in tagged cardiac MRI using active contours: A gradient-based approach integrating texture analysis. International Journal of Biomedical Imaging, 2009, 983794:1–983794:8.

    Google Scholar 

  • Hu, J., Shen, L., & Sun, G. (2018). Squeeze-and-excitation networks. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (pp. 7132–7141).

    Google Scholar 

  • Long, J., Shelhamer, E., & Darrell, T. (2015). Fully convolutional networks for semantic segmentation. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (pp. 3431–3440).

    Google Scholar 

  • Matuszewski, B. J., Murphy, M. F., Burton, D. R., Marchant, T. E., Moore, C. J., Histace, A., et al. (2011). Segmentation of cellular structures in actin tagged fluorescence confocal microscopy images. In 2011 18th IEEE International Conference on Image Processing (pp. 3081–3084).

    Google Scholar 

  • Peng, C., Zhang, X., Yu, G., Luo, G., & Sun, J. (2017). Large kernel matters–improve semantic segmentation by global convolutional network. In IEEE Conference on Computer Vision and Pattern Recognition (CVPR), Honolulu, HI, USA (pp. 1743–1751). IEEE.

    Google Scholar 

  • Ronneberger, O., Fischer, P., & Brox, T. (2015). U-Net: Convolutional networks for biomedical image segmentation. In International Conference on Medical Image Computing and Computer-Assisted Intervention (pp. 234–241). Springer.

    Google Scholar 

  • Simonyan, K., & Zisserman, A. (2015). Very deep convolutional networks for large-scale image recognition. In 3rd International Conference on Learning Representations, (ICLR), San Diego, CA, USA. May 7–9arXiv:1409.1556.

    Google Scholar 

  • Yu, F., & Koltun, V. (2016). Multi-scale context aggregation by dilated convolutions. In /textit4th International Conference on Learning Representations, (ICLR), San Juan, Puerto Rico. May 2–4. arXiv:1511.07122.

  • Zhang, Y., Matuszewski, B. J., Histace, A., Precioso, F., Kilgallon, J., & Moore, C. (2010). Boundary delineation in prostate imaging using active contour segmentation method with interactively defined object regions. In International Workshop on Prostate Cancer Imaging (pp. 131–142). Springer.

    Google Scholar 

  • Zhang, Y., Matuszewski, B. J., Histace, A., & Precioso, F. (2013). Statistical model of shape moments with active contour evolution for shape detection and segmentation. Journal of Mathematical Imaging and Vision, 47(1–2), 35–47.

    Article  Google Scholar 

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Correspondence to Yunbo Guo .

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Guo, Y., Matuszewski, B.J. (2021). Dilated ResFCN and SE-Unet for Polyp Segmentation. In: Bernal, J., Histace, A. (eds) Computer-Aided Analysis of Gastrointestinal Videos. Springer, Cham. https://doi.org/10.1007/978-3-030-64340-9_8

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  • DOI: https://doi.org/10.1007/978-3-030-64340-9_8

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