Abstract
Coronavirus Disease 2019 (COVID-19) has been spreading rapidly, threatening global health. Computer-aided screening on chest computed tomography (CT) images using deep learning, especially, lesion segmentation, is an effective complement for COVID-19 diagnosis. Although edge detection highly benefits lesion segmentation, an independent COVID-19 edge detection task in CT scans has been unprecedented and faces several difficulties, e.g., ambiguous boundaries, noises and diverse edge shapes. To this end, we propose the first COVID-19 lesion edge detection model: COVID Edge-Net, containing one edge detection backbone and two new modules: the multi-scale residual dual attention (MSRDA) module and the Canny operator module. MSRDA module helps capture richer contextual relationships for obtaining better deep learning features, which are fused with Canny features from Canny operator module to extract more accurate, refined, clearer and sharper edges. Our approach achieves the state-of-the-art performance and can be a benchmark for COVID-19 edge detection. Code related to this paper is available at: https://github.com/Elephant-123/COVID-Edge-Net.
Supported by the National Key Research and Development Program of China (Grant No. 2018YFB0204301).
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References
Zhu, N., et al.: A novel coronavirus from patients with pneumonia in China, 2019. N. Engl. J. Med. 382(8) (2020)
Wang, C., Horby, P.W., Hayden, F.G., Gao, G.F.: A novel coronavirus outbreak of global health concern. Lancet 395(10223), 470–473 (2020)
Oudkerk, M., Büller, H.R., Kuijpers, D., et al.: Diagnosis, prevention, and treatment of thromboembolic complications in COVID-19: report of the national institute for public health of the Netherlands. Radiology 297(1), E216–E222 (2020)
Coronavirus COVID-19 global cases by the center for systems science and engineering at johns Hopkins university. https://coronavirus.jhu.edu/map.html. Accessed 24 November 2020
Liang, T., et al.: Handbook of COVID-19 prevention and treatment. The first affiliated hospital, Zhejiang university school of medicine. Compil. Accord. Clin. Exp. 68 (2020)
Shan, F., et al.: Lung infection quantification of COVID-19 in CT images with deep learning. arXiv preprint arXiv:2003.04655 (2020)
Fang, Y., et al.: Sensitivity of chest CT for COVID-19: comparison to RT-PCR. Radiology 296(2), E115–E117 (2020)
Ai, T., et al.: Correlation of chest CT and RT-PCR testing for coronavirus disease 2019 (COVID-19) in china: a report of 1014 cases. Radiology 296(2), E32–E40 (2020)
Ng, M.Y., et al.: Imaging profile of the COVID-19 infection: radiologic findings and literature review. Radiol. Cardiothorac. Imaging 2(1), e200034 (2020)
Kang, H., et al.: Diagnosis of coronavirus disease 2019 (COVID-19) with structured latent multi-view representation learning. IEEE Trans. Med. Imaging 39(8), 2606–2614 (2020)
Wang, J., et al.: Prior-attention residual learning for more discriminative COVID-19 screening in CT images. IEEE Trans. Med. Imaging 39(8), 2572–2583 (2020)
Hu, Y., Chen, Y., Li, X., Feng, J.: Dynamic feature fusion for semantic edge detection. arXiv preprint arXiv:1902.09104 (2019)
Fan, D.P., et al.: Inf-net: automatic COVID-19 lung infection segmentation from CT images. IEEE Trans. Med. Imaging 39(8), 2626–2637 (2020)
Yu, Z., Feng, C., Liu, M.Y., Ramalingam, S.: CASENet: deep category-aware semantic edge detection. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 5964–5973 (2017). https://doi.org/10.1109/CVPR.2017.191
Qiu, Y., Liu, Y., Xu, J.: Miniseg: An extremely minimum network for efficient covid-19 segmentation. arXiv preprint arXiv:2004.09750 (2020)
Wang, Y., et al.: Does non-COVID19 lung lesion help? investigating transferability in COVID-19 CT image segmentation. arXiv preprint arXiv:2006.13877 (2020)
Müller, D., Rey, I.S., Kramer, F.: Automated chest CT image segmentation of COVID-19 lung infection based on 3d u-net. arXiv preprint arXiv:2007.04774 (2020)
Zhou, T., Canu, S., Ruan, S.: An automatic COVID-19 CT segmentation network using spatial and channel attention mechanism. arXiv preprint arXiv:2004.06673 (2020)
Chen, X., Yao, L., Zhang, Y.: Residual attention u-net for automated multi-class segmentation of COVID-19 chest CT images. arXiv preprint arXiv:2004.05645 (2020)
COVID-19 CT segmentation dataset. https://medicalsegmentation.com/covid19/
He, K., Zhang, X., Ren, S., Sun, J.: Deep residual learning for image recognition. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 770–778 (2016). https://doi.org/10.1109/CVPR.2016.90
Deng, J., Dong, W., Socher, R., Li, L.J., Li, K., Fei-Fei, L.: ImageNet: a large-scale hierarchical image database. In: 2009 IEEE Conference on Computer Vision and Pattern Recognition, pp. 248–255. IEEE (2009). https://doi.org/10.1109/CVPR.2009.5206848
Ronneberger, O.: Invited talk: u-net convolutional networks for biomedical image segmentation. In: Bildverarbeitung für die Medizin 2017. I, pp. 3–3. Springer, Heidelberg (2017). https://doi.org/10.1007/978-3-662-54345-0_3
Zhou, Z., Rahman Siddiquee, M.M., Tajbakhsh, N., Liang, J.: UNet++: a nested u-net architecture for medical image segmentation. In: Stoyanov, D., et al. (eds.) DLMIA/ML-CDS -2018. LNCS, vol. 11045, pp. 3–11. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00889-5_1
Oktay, O., et al.: Attention u-net: Learning where to look for the pancreas. arXiv preprint arXiv:1804.03999 (2018)
Li, X., Chen, H., Qi, X., Dou, Q., Fu, C.W., Heng, P.A.: H-DenseUNet: hybrid densely connected UNet for liver and tumor segmentation from CT volumes. IEEE Trans. Med. Imaging 37(12), 2663–2674 (2018)
Schlemper, J., et al.: Attention gated networks: learning to leverage salient regions in medical images. Med. Image Anal. 53, 197–207 (2019)
Canny, J.: A computational approach to edge detection. IEEE Trans. Pattern Anal. Mach. Intell. PAMI 8(6), 679–698 (1986)
Woo, S., Park, J., Lee, J.Y., So Kweon, I.: CBAM: convolutional block attention module. In: Proceedings of the European Conference on Computer Vision (ECCV), pp. 3–19 (2018). https://doi.org/10.1007/978-3-030-01234-2_1
Wang, Q., Wu, B., Zhu, P., Li, P., Zuo, W., Hu, Q.: ECA-Net: efficient channel attention for deep convolutional neural networks. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 11534–11542 (2020)
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Wang, K., Zhao, Y., Dou, Y., Wen, D., Gao, Z. (2021). COVID Edge-Net: Automated COVID-19 Lung Lesion Edge Detection in Chest CT Images. In: Dong, Y., Kourtellis, N., Hammer, B., Lozano, J.A. (eds) Machine Learning and Knowledge Discovery in Databases. Applied Data Science Track. ECML PKDD 2021. Lecture Notes in Computer Science(), vol 12978. Springer, Cham. https://doi.org/10.1007/978-3-030-86514-6_18
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