Skip to main content

Unsupervised Cross-modality Cardiac Image Segmentation via Disentangled Representation Learning and Consistency Regularization

  • Conference paper
  • First Online:
Machine Learning in Medical Imaging (MLMI 2021)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 12966))

Included in the following conference series:

  • 4114 Accesses

Abstract

Deep neural networks based approaches for medical image segmentation rely heavily on the availability of large amount of annotated data, which sometimes is difficult to obtain due to time, logistic effort and the requirement of expertise knowledge. Unpaired image translation enables a cross-modality segmentation network to be trained in an annotation-poor target domain by leveraging an annotation-rich source domain but most existing methods separate the image translation stage from the image segmentation stage and are not trained end-to-end. In this paper, we propose an end-to-end unsupervised cross-modality cardiac image segmentation method, taking advantage of diverse image translation via disentangled representation learning and consistency regularization in one network. Different from learning one-to-one mapping, our method characterizes the complex relationship between domains as many-to-many mapping. A novel diverse inter-domain semantic consistency loss is then proposed to regularize the cross-modality segmentation process. We additionally introduce an intra-domain semantic consistency loss to encourage the segmentation consistency between the original input and the image after cross-cycle reconstruction. We conduct comprehensive experiments on two publicly available datasets to evaluate the effectiveness of the proposed method. The experimental results demonstrate the efficacy of the present approach.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Chen, C., et al.: Deep learning for cardiac image segmentation: a review. Front. Cardiovasc. Med. 7, 25 (2020)

    Article  Google Scholar 

  2. Shi, Z., et al.: Bayesian VoxDRN: a probabilistic deep voxelwise dilated residual network for whole heart segmentation from 3D MR images. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 569–577. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00937-3_65

    Chapter  Google Scholar 

  3. Zhuang, X., et al.: Evaluation of algorithms for multi-modality whole heart segmentation: an open-access grand challenge. Med. Image Anal. 58, 101537 (2019)

    Article  Google Scholar 

  4. Cheplygina, V., de Bruijne, M., Pluim, J.P.: Not-so-supervised: a survey of semi-supervised, multi-instance, and transfer learning in medical image analysis. Med. Image Anal. 54, 280–296 (2019)

    Article  Google Scholar 

  5. Petitjean, C., Dacher, J.N.: A review of segmentation methods in short axis cardiac MR images. Med. Image Anal. 15(2), 169–184 (2011)

    Article  Google Scholar 

  6. Wu, F., Zhuang, X.: CF distance: a new domain discrepancy metric and application to explicit domain adaptation for cross-modality cardiac image segmentation. IEEE Trans. Med. Imaging 39(12), 4274–4285 (2020)

    Article  Google Scholar 

  7. Dou, Q., et al.: PnP-AdaNet: plug-and-play adversarial domain adaptation network at unpaired cross-modality cardiac segmentation. IEEE Access 7, 99065–99076 (2019)

    Article  Google Scholar 

  8. Chen, C., Dou, Q., Chen, H., Qin, J., Heng, P.A.: Unsupervised bidirectional cross-modality adaptation via deeply synergistic image and feature alignment for medical image segmentation. IEEE Trans. Med. Imaging 39(7), 2494–2505 (2020)

    Article  Google Scholar 

  9. Huo, Y., et al.: SynSeg-Net: synthetic segmentation without target modality ground truth. IEEE Trans. Med. Imaging 38(4), 1016–1025 (2018)

    Article  Google Scholar 

  10. Zhang, Z., Yang, L., Zheng, Y.: Translating and segmenting multimodal medical volumes with cycle-and shape-consistency generative adversarial network. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 9242–9251 (2018)

    Google Scholar 

  11. Yang, J., Dvornek, N.C., Zhang, F., Chapiro, J., Lin, M.D., Duncan, J.S.: Unsupervised domain adaptation via disentangled representations: application to cross-modality liver segmentation. In: Shen, D., et al. (eds.) MICCAI 2019. LNCS, vol. 11765, pp. 255–263. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-32245-8_29

    Chapter  Google Scholar 

  12. Chen, C., et al.: Unsupervised multi-modal style transfer for cardiac MR segmentation. In: Pop, M., et al. (eds.) STACOM 2019. LNCS, vol. 12009, pp. 209–219. Springer, Cham (2020). https://doi.org/10.1007/978-3-030-39074-7_22

    Chapter  Google Scholar 

  13. Chen, X., et al.: Anatomy-regularized representation learning for cross-modality medical image segmentation. IEEE Trans. Med. Imaging 40(1), 274–285 (2020)

    Article  Google Scholar 

  14. Chen, X., et al.: Diverse data augmentation for learning image segmentation with cross-modality annotations. Med. Image Anal. 71, 102060 (2021)

    Article  Google Scholar 

  15. Zhu, J.Y., Park, T., Isola, P., Efros, A.A.: Unpaired image-to-image translation using cycle-consistent adversarial networks. In: Proceedings of the IEEE International Conference on Computer Vision, pp. 2223–2232 (2017)

    Google Scholar 

  16. Mao, Q., Lee, H.Y., Tseng, H.Y., Ma, S., Yang, M.H.: Mode seeking generative adversarial networks for diverse image synthesis. In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition, pp. 1429–1437 (2019)

    Google Scholar 

  17. Lee, H.Y., et al.: DRIT++: diverse image-to-image translation via disentangled representations. Int. J. Comput. Vis. 128(10), 2402–2417 (2020)

    Article  Google Scholar 

  18. Hoffman, J., et al.: Cycada: cycle-consistent adversarial domain adaptation. In: International Conference on Machine Learning, PMLR, pp. 1989–1998 (2018)

    Google Scholar 

  19. Zhao, H., Shi, J., Qi, X., Wang, X., Jia, J.: Pyramid scene parsing network. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 2881–2890 (2017)

    Google Scholar 

  20. Zhuang, X.: Multivariate mixture model for myocardial segmentation combining multi-source images. IEEE Trans. Pattern Anal. Mach. Intell. 41(12), 2933–2946 (2018)

    Article  Google Scholar 

Download references

Acknowledgments

This study was partially supported by Shanghai Municipal Science and Technology Commission via Project 20511105205 and 20DZ2220400, and by the Natural Science Foundation of China via project U20A20199.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Guoyan Zheng .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Wang, R., Zheng, G. (2021). Unsupervised Cross-modality Cardiac Image Segmentation via Disentangled Representation Learning and Consistency Regularization. In: Lian, C., Cao, X., Rekik, I., Xu, X., Yan, P. (eds) Machine Learning in Medical Imaging. MLMI 2021. Lecture Notes in Computer Science(), vol 12966. Springer, Cham. https://doi.org/10.1007/978-3-030-87589-3_53

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-87589-3_53

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-87588-6

  • Online ISBN: 978-3-030-87589-3

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics