Abstract
Computed tomography (CT) perfusion imaging is a routinely used technique in the field of neurovascular imaging. The progression of a bolus of contrast agent through the neurovasculature is imaged in a series of CT scans. Relevant perfusion parameters, such as cerebral blood volume (CBV), flow (CBF) and delay (Tmax), can be computed by deconvolution of the contrast-time curves with the bolus shape measured at one of the feeding arteries. These parameters are crucial in the medical management of acute stroke patients, where they are used to identify the extent of likely salvageable tissue and irreversibly damaged infarct core. Deconvolution is normally achieved using singular value decomposition (SVD). However, studies have shown that such a technique is noise sensitive and easily influenced by artifacts in the source image, and may introduce further distortions in the output parameters. In this study, we present a machine learning approach to the estimation of perfusion parameters from CT imaging. Standard types of regression-based machine learning models were trained on the raw/native CT perfusion imaging data to reproduce the output of an FDA-approved commercial implementation of the SVD deconvolution algorithm. As part of our experiments, Kernel ridge regression and random forest models performed best (SSIM: \(~82\%, ~84\%\)), trading off quick run time for better prediction accuracy while requiring a relatively low number of training examples.
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References
Campbell, B.C., et al.: Imaging selection in ischemic stroke: feasibility of automated ct-perfusion analysis. Int. J. Stroke 10, 51–54 (2015)
Vagal, A., et al.: Automated CT perfusion imaging for acute ischemic stroke: pearls and pitfalls for real-world use. Neurology 93, 888–898 (2019)
Tong, E., Sugrue, L., Wintermark, M.: Understanding the neurophysiology and quantification of brain perfusion. Top Magn. Reson. Imaging 26, 57–65 (2017)
Farr, T.D., et al.: Use of magnetic resonance imaging to predict outcome after stroke: a review of experimental and clinical evidence. J. Cerebral Blood Flow Metab. 30(4), 703–717 (2010)
Kudo, K., et al.: Differences in CT perfusion maps generated by different commercial software: quantitative analysis by using identical source data of acute stroke patients. Radiology 254, 200–209 (2010)
Andersen, I.K., et al.: Perfusion quantification using Gaussian process deconvolution. Magn. Reson. Med. 48, 351–361 (2002)
Calamante, F., Gadian, D.G., Connelly, A.: Quantification of bolus-tracking MRI: improved characterization of the tissue residue function using Tikhonov regularization. Magn. Reson. Med. 50, 1237–1247 (2003)
Mouridsen, K., Friston, K., Hjort, N., Gyldensted, L., Ostergaard, L., Kiebel, S.: Bayesian estimation of cerebral perfusion using a physiological model of microvasculature. Neuroimage 33, 570–579 (2006)
Vonken, E.P., Beekman, F.J., Bakker, C.J., Viergever, M.A.: Maximum likelihood estimation of cerebral blood flow in dynamic susceptibility contrast MRI. Magn. Reson. Med. 41, 343–350 (1999)
Boutelier, T., Kudo, K., Pautot, F., Sasaki, M.: Bayesian hemodynamic parameter estimation by bolus tracking perfusion weighted imaging. IEEE Trans. Med. Imaging 31, 1381–1395 (2012)
Wu, D., Ren, H., Li, Q.: Self-supervised dynamic ct perfusion image denoising with deep neural networks (2020)
Zhu, H., et al.: Temporally downsampled cerebral CT perfusion image restoration using deep residual learning. Int. J. Comput. Assist. Radiol. Surg 15(2), 193–201 (2019). https://doi.org/10.1007/s11548-019-02082-1
Stier, N., Vincent, N., Liebeskind, D., Scalzo, F.: Deep learning of tissue fate features in acute ischemic stroke. In: IEEE International Conference on Bioinformatics Biomedicine, Proceedings 2015, pp. 1316–1321 (2015)
Scalzo, F., Hao, Q., Alger, J.R., Hu, X., Liebeskind, D.S.: Regional prediction of tissue fate in acute ischemic stroke. Ann. Biomed. Eng. 40, 2177–2187 (2012)
Yu, Y., Guo, D., Lou, M., Liebeskind, D., Scalzo, F.: Prediction of hemorrhagic transformation severity in acute stroke from source perfusion MRI. IEEE Trans. Biomed. Eng. 65, 2058–2065 (2018)
McKinley, R., Hung, F., Wiest, R., Liebeskind, D.S., Scalzo, F.: A machine learning approach to perfusion imaging with dynamic susceptibility contrast MR. Front. Neurol. 9, 717 (2018)
Feghhi, E., Zhou, Y., Tran, J., Liebeskind, D., Scalzo, F.: Angio-ai: cerebral perfusion angiography with machine learning. In: ISVC (2019)
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Cheng, K., Atchaneeyasakul, K., Barakat, Z., Liebeskind, D.S., Scalzo, F. (2021). CT Perfusion Imaging of the Brain with Machine Learning. In: Bebis, G., et al. Advances in Visual Computing. ISVC 2021. Lecture Notes in Computer Science(), vol 13018. Springer, Cham. https://doi.org/10.1007/978-3-030-90436-4_4
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DOI: https://doi.org/10.1007/978-3-030-90436-4_4
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